Gene Pfl01_0129 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_0129 
Symbol 
ID3717872 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp140922 
End bp141632 
Gene Length711 bp 
Protein Length236 aa 
Translation table11 
GC content64% 
IMG OID 
ProductGntR family transcriptional regulator 
Protein accessionYP_345862 
Protein GI77456357 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACCCAGA AGCCCAAGCC ACTCCACAGC ATCAAAGTCG ACGGCCCGAT TCCCGCGCAT 
CTGGCACGCT CGGTCATCGA AGAAACCCTG CGCGCCGCGA TTCTCGACGG GCGCCTGCCC
TGCGGCACCG CCGTGCGCCA GCAGGATCTG GCCGATCTGT TCGGCGTCAG CCGCATGCCG
GTACGCGAAG CCTTGCGTCA ACTCGAAGCC CAGGGCCTGC TCAACGTGAT TGCCCACAAA
GGCGCGGTGG TGGCGCCGCT GATCCAGGGC GATGCAACGG AAACCTACGA GCTGCGCATC
CTGCTGGAGT CCGAAGCGCT GCGCCAGTCG ATCCCGCTGC TGTCCCCGGC CGATCACGAA
CGCGCGGCCG GCTACATCGA AGAACTGGAA ATCGAACACG ACTACACCGA AATCGGTCGG
CTCAACCGTC TGTTTCACAT GGCACTCTAC AGCAAGGCGC CCAATGGCCG GCTGTTGCGG
CTGGTGGAAG ACGGCTTGAA TGAGGAAGAA CGCTTCCTGC GCTTCAACCT CGAGGCCATG
GGCCTGGGCA AGCTCTCCCA GGACGATCAC CGCGCGTTGT TGCAGGCCGT GAAAGAGCGT
GACACACCGC ACGCCGTGAC ACTGCTGGAG CAGCACCTCA ATCGCGGTGT CGAGGTGATC
ACCCGTTACC TGGCCAGCTC CGCCGGCCAA AGCCGCAAAG CGGCGCGCTG A
 
Protein sequence
MTQKPKPLHS IKVDGPIPAH LARSVIEETL RAAILDGRLP CGTAVRQQDL ADLFGVSRMP 
VREALRQLEA QGLLNVIAHK GAVVAPLIQG DATETYELRI LLESEALRQS IPLLSPADHE
RAAGYIEELE IEHDYTEIGR LNRLFHMALY SKAPNGRLLR LVEDGLNEEE RFLRFNLEAM
GLGKLSQDDH RALLQAVKER DTPHAVTLLE QHLNRGVEVI TRYLASSAGQ SRKAAR