Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_0129 |
Symbol | |
ID | 3717872 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | - |
Start bp | 140922 |
End bp | 141632 |
Gene Length | 711 bp |
Protein Length | 236 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | |
Product | GntR family transcriptional regulator |
Protein accession | YP_345862 |
Protein GI | 77456357 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 38 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGACCCAGA AGCCCAAGCC ACTCCACAGC ATCAAAGTCG ACGGCCCGAT TCCCGCGCAT CTGGCACGCT CGGTCATCGA AGAAACCCTG CGCGCCGCGA TTCTCGACGG GCGCCTGCCC TGCGGCACCG CCGTGCGCCA GCAGGATCTG GCCGATCTGT TCGGCGTCAG CCGCATGCCG GTACGCGAAG CCTTGCGTCA ACTCGAAGCC CAGGGCCTGC TCAACGTGAT TGCCCACAAA GGCGCGGTGG TGGCGCCGCT GATCCAGGGC GATGCAACGG AAACCTACGA GCTGCGCATC CTGCTGGAGT CCGAAGCGCT GCGCCAGTCG ATCCCGCTGC TGTCCCCGGC CGATCACGAA CGCGCGGCCG GCTACATCGA AGAACTGGAA ATCGAACACG ACTACACCGA AATCGGTCGG CTCAACCGTC TGTTTCACAT GGCACTCTAC AGCAAGGCGC CCAATGGCCG GCTGTTGCGG CTGGTGGAAG ACGGCTTGAA TGAGGAAGAA CGCTTCCTGC GCTTCAACCT CGAGGCCATG GGCCTGGGCA AGCTCTCCCA GGACGATCAC CGCGCGTTGT TGCAGGCCGT GAAAGAGCGT GACACACCGC ACGCCGTGAC ACTGCTGGAG CAGCACCTCA ATCGCGGTGT CGAGGTGATC ACCCGTTACC TGGCCAGCTC CGCCGGCCAA AGCCGCAAAG CGGCGCGCTG A
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Protein sequence | MTQKPKPLHS IKVDGPIPAH LARSVIEETL RAAILDGRLP CGTAVRQQDL ADLFGVSRMP VREALRQLEA QGLLNVIAHK GAVVAPLIQG DATETYELRI LLESEALRQS IPLLSPADHE RAAGYIEELE IEHDYTEIGR LNRLFHMALY SKAPNGRLLR LVEDGLNEEE RFLRFNLEAM GLGKLSQDDH RALLQAVKER DTPHAVTLLE QHLNRGVEVI TRYLASSAGQ SRKAAR
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