| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pfl01_0127 |
|---|
| Symbol | |
|---|
| ID | 3717870 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas fluorescens Pf0-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007492 |
|---|
| Strand | - |
|---|
| Start bp | 138468 |
|---|
| End bp | 139397 |
|---|
| Gene Length | 930 bp |
|---|
| Protein Length | 309 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_345860 |
|---|
| Protein GI | 77456355 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 36 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 8 |
|---|
| Fosmid unclonability p-value | 0.426246 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACGCCG CCGACTACCA GTCTTTCGCC GACGCCTGGG AAAGCCGCGC GACCATTCGC
ACCAGACCAC GCCGCGTGCT GGAGGGCGAC GCGCGGCTGA TCTATCCGCT CAGCCGCCAG
CCGTTGGTGC TCAGCGAAAC CTTCCTGCGC GAATGCCCGG AACAGCGTGA TTTCGCCTTG
GTGCAGACGC TGTACAAATT CATCAACGAC GTGGTGATTT TCGAAACCGA GATCGTCGAC
AAAACCGCGC GCAGCATCGC CAAGAACCGC TTCGCCGTGG CCTTCCCGTT CGCCTGTCGC
TACGACGCCA TGACCGTGGT GGTGGACGAG GATTACCACG CGTTGGTAGC GATGGATTTC
ATGCAGCAGA CCGTGGCCAT GACCGGCGTC GAGCCGATCG AGCTGCCGAA TGAAATCGAA
CTGAGCCGGG CGATTCCGGC TGCCGTCGAA CTGGCCCCGG AGCACCTGCG CAGCGCCGTG
GAACTGATCT GCGTCGCCAT CGCCGAGAAC ACCGTGACCG GCGATGTCGC AGCGTTCGCC
CGGGACGACA CGGTCAAGCC GTCGATCAAG GGCCTGATGG CCGACCACTT GCTCGACGAG
GGCCGGCACT CGAATTTCTG GGCGCGGATG GTGCGTATCT ACTGGCATAC CGCGAGCGAT
GCGGATCGCG AATGCATCGC GCAGATCCTG CCGGTGTTCA TCGGCCATTA CCTGACCAAC
GACATCCAGA AGTCCTTCGA CCTGCGCCTG ATCGATGCCT TGCCGGTCAA CGATGCAACG
CGTCGAGCGC TGAAGGACGA GATGGCCGGA CTGGCCTTCC CGATCAATCG TCATCACCCG
CTGGTGGGCA ACATCGTGCG CTTTTTCCAC AACAGCTCAC TGCTCGACAC TCCGTGCGTG
CAGCACGCCC TGCGCGACTA CCTGGTTTGA
|
|---|
| Protein sequence | MNAADYQSFA DAWESRATIR TRPRRVLEGD ARLIYPLSRQ PLVLSETFLR ECPEQRDFAL
VQTLYKFIND VVIFETEIVD KTARSIAKNR FAVAFPFACR YDAMTVVVDE DYHALVAMDF
MQQTVAMTGV EPIELPNEIE LSRAIPAAVE LAPEHLRSAV ELICVAIAEN TVTGDVAAFA
RDDTVKPSIK GLMADHLLDE GRHSNFWARM VRIYWHTASD ADRECIAQIL PVFIGHYLTN
DIQKSFDLRL IDALPVNDAT RRALKDEMAG LAFPINRHHP LVGNIVRFFH NSSLLDTPCV
QHALRDYLV
|
|---|
| |