Gene Pfl01_0114 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_0114 
Symbol 
ID3717813 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp115794 
End bp116915 
Gene Length1122 bp 
Protein Length373 aa 
Translation table11 
GC content62% 
IMG OID 
ProductNAD(P)(+) transhydrogenase (AB-specific) 
Protein accessionYP_345847 
Protein GI77456342 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCACATTG GTGTTCCTCT CGAAACCCAG ACCGGTGAAA CACGGGTTGC TGCAACCCCG 
GAAACCATTA AAAAGCTGAT CAGCCAAGGT CATAAGGTCA CTGTGCAAAC CGGCGCCGGC
GTTAAAGCCA GCGTTGTCGA CAGTGCCTAT GAAGCGGCAG GCGCAACCAT TGGCAGTGCC
AATGACGCGT TTGGCGCCGA GCTGATTCTC AAAGTGGTCG CGCCAAGCGA TGCCGAACTG
ACGCTGATCA AGCGCGGAAC GGTGCTGGTG GGCATGCTCA ACCCATTCAA CAACGACACC
ATCGCAAAGA TGGCCGAGTG CGGGATTACC GCGTTTGCCC TGGAAGCGGC GCCACGTACC
TCCCGGGCCC AGAGCCTCGA CGTGCTGTCA TCCCAGGCGA ACATTGCCGG CTATAAGGCC
GTGCTGCTGG CCGCTCATTA CTATCCGCGC TTCATGCCGA TGCTGATGAC TGCTGCGGGC
ACCGTGAAAG CGGCGCGCGT GCTGATTCTG GGGGCTGGTG TGGCCGGGTT GCAGGCGATT
GCCACGGCGA AACGTCTGGG TGCCGTCATC GAAGCGTCCG ACGTACGTCC GGCCGTGAAG
GAACAGATCG AATCCCTCGG CGCCAAGTTC GTCGACGTGC CTTACGAAAC CGATGAAGAA
CGCGAATGCG CGGTCGGCGT CGGCGGTTAC GCACGCCCGA TGCCGGCGAG CTGGATGCAG
CGTCAGGCCC AAGCCGTGCA CGAGCGCGCC AAGCAGGCTG ACATCGTCAT CACCACCGCA
CTGATACCGG GCCGCAAGGC ACCGACGCTG TTGAGCGCGG ACACCGTGGC GCAGATGAAA
CCCGGCTCGG TGGTCATCGA CCTCGCTGCA GCCCAGGGTG GCAACTGCCC GCTGACCGTG
GCCGATCAGG TCGTGATCGA GAACGGCGTG ACCATCGTCG GCCCGACCAA CCTCGCCGGT
GAAGTCGCCG CAGACGCCTC GGCGCTGTAT GCACGCAACC TGCTGGACTT CCTGAAGCTG
GTCTTCACCA AAGAAGGCCA GTTCGAAGTA AACCTCGAAG ACGATATCGT CGCCGCGTGC
CTGATGTGCC GCGACGGCCA AGTCATCCGC AAAAACGCCT AA
 
Protein sequence
MHIGVPLETQ TGETRVAATP ETIKKLISQG HKVTVQTGAG VKASVVDSAY EAAGATIGSA 
NDAFGAELIL KVVAPSDAEL TLIKRGTVLV GMLNPFNNDT IAKMAECGIT AFALEAAPRT
SRAQSLDVLS SQANIAGYKA VLLAAHYYPR FMPMLMTAAG TVKAARVLIL GAGVAGLQAI
ATAKRLGAVI EASDVRPAVK EQIESLGAKF VDVPYETDEE RECAVGVGGY ARPMPASWMQ
RQAQAVHERA KQADIVITTA LIPGRKAPTL LSADTVAQMK PGSVVIDLAA AQGGNCPLTV
ADQVVIENGV TIVGPTNLAG EVAADASALY ARNLLDFLKL VFTKEGQFEV NLEDDIVAAC
LMCRDGQVIR KNA