Gene Pfl01_0079 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_0079 
Symbol 
ID3717778 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp83064 
End bp84191 
Gene Length1128 bp 
Protein Length375 aa 
Translation table11 
GC content60% 
IMG OID 
Productcytochrome c oxidase, subunit II 
Protein accessionYP_345812 
Protein GI77456307 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGCGAC ATCCACACGT CTGGATGGGC CTCCTGTTGT GGTCGATTTT CAGCCCGGTG 
CAAGCTGCCT GGACTGTGAA TATGGCGCCT GGAGCGACTG AAATCAGTCA CGCAGTATTC
GACCTGCACA TGACCATTTT CTGGATCTGT GTGGTGATCG GGATCATCGT CTTCGGCGCC
ATGTTCTGGT CGATGATGGT GCACCGCCGT TCTACCGGGC AGGTCGCCGC AAAATTCCAC
GAAAGCACCA CCGTCGAAAT TCTCTGGACC GTCGTCCCGC TGCTGATTCT GGTGGCGATG
GCCGTTCCGG CGACCGCGAC CCTGATCAAG ATGTACGACA CCAGTGAGCC GGATATCGAT
ATCCAGATCA CCGGTTATCA GTGGAAGTGG CACTACAAAT ACCTGGGCCA GGACGTCGAG
TTCTTCAGCA ACCTGGCCAC GCCCGCCGAG CAGATCCACA ACAAGGAAGC CAAGGGCGAG
CACTACCTGC TCGAGGTCGA CAAGCCGCTG GTGCTGCCGA CCGGCGCCAA GGTGCGCTTC
CTCGTGACCT CCGCCGACGT GATCCACTCC TGGTGGGTGC CGGCCTTCGC GGTCAAGCGC
GATGCGATTC CCGGGTTCGT CAACGAAGCC TGGACCCGCA TCGACAAGCC CGGCCTCTAC
CGTGGCCAGT GCGCCGAGCT GTGCGGCAAG GATCACGGCT TCATGCCGAT CGTGGTCGAC
GTCAAGGAGA AGGCCGACTA CGAAAAATGG CTCGCCGAGC GCAAGGCCGA AGCGTTGCAG
CTCAAGGAGC TGACCAGCAA GGAATGGACC CTCGACGAAC TCAAGGAACG TGGCGACAAG
ATCTACCACA CCACCTGCGT CGCCTGTCAC CAGGCTGAAG GCCAGGGCCT GCCGCCGATG
TTCCCGGCCC TCAAAGGCTC GAAAATCGCC ACCGGCCCGA AAGAGGCGCA CCTGAGCATT
GTCTTCCACG GCAAGCCCGG CACCGCCATG GCGGCGTTCG GCAAGCAGCT GTCGGAAGTC
GATATCGCAG CGGTCGTGAC CTACGAACGT AACGCCTGGG GCAACAACAA GGGCGACATG
GTCACGCCAA AAGAAGTGCT GGAGCTGAAA CAGGCGGAAA GCAAATGA
 
Protein sequence
MMRHPHVWMG LLLWSIFSPV QAAWTVNMAP GATEISHAVF DLHMTIFWIC VVIGIIVFGA 
MFWSMMVHRR STGQVAAKFH ESTTVEILWT VVPLLILVAM AVPATATLIK MYDTSEPDID
IQITGYQWKW HYKYLGQDVE FFSNLATPAE QIHNKEAKGE HYLLEVDKPL VLPTGAKVRF
LVTSADVIHS WWVPAFAVKR DAIPGFVNEA WTRIDKPGLY RGQCAELCGK DHGFMPIVVD
VKEKADYEKW LAERKAEALQ LKELTSKEWT LDELKERGDK IYHTTCVACH QAEGQGLPPM
FPALKGSKIA TGPKEAHLSI VFHGKPGTAM AAFGKQLSEV DIAAVVTYER NAWGNNKGDM
VTPKEVLELK QAESK