Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_0068 |
Symbol | |
ID | 3717708 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | - |
Start bp | 74089 |
End bp | 74886 |
Gene Length | 798 bp |
Protein Length | 265 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | |
Product | integrase catalytic subunit |
Protein accession | YP_345801 |
Protein GI | 77456296 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGGATTT CCCGTCAGGC TTATTACAAG CGCAACCGCG CGTGTGATGC CCGGGCCCGT CATGCCCAGG AAGTGATGGG ATTCGTGAGG GAGAAACGAC TTAGGCAACC GCGCCTTGGC ACCCGAAAAC TTCACAATCT GATGCACACT GAGCCAGAGG TGTCCGTAAA GGTCGGTCGA GACCGGTTAT TCGATATCTT GCGAGATCGG CGCGAGCTGG TTCCCCGCAG ACGGGCCTAT CACAAAACGA CAGATAGCCA TCATCGCTTT CGCCGGCATC CAAACCTGCT CAAAGATGGA CCGATTCAGG TAGTTGCCAA GGCGCCAGAG CAAGTATGGG TTGCGGACAT CACCTACCTA CCGACGCAAA CGGGTGTGGC TTATCTGAGT TTGATCACCG ATGCGTACTC CCGAAAAATC GTGGGGCACC ATGTCCATGA AAGCTTGCAC ACCGAATCGG TGATCCAGGC GTTCAACAAA GCCCTCAAGC AGCGGACAAC GAAGCAATGT TTGGTGCATC ACTCGGATAG AGGCGTCCAA TACTGCTCCG AGCTTTATCA GCGGCTGCAT GCCAAATACG GCATCACCTG CTCAATGACC GATGGCTACG ACTGCTACCA AAACGCGTTG GCTGAGCGTG TGAACGGGAT TTTGAAAAAC GAGTTATTGC TGCATCGCCC CAAAAATTTT GCAGAGGCCA TCCGGATGGT GGACGAGTCG GTGCAGATCT ATAACAACGA GCGGCCTCAT CTGTCGCTGA AATACAAAAC ACCCGATGCG GTGCATCGGG CGTTTTGA
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Protein sequence | MGISRQAYYK RNRACDARAR HAQEVMGFVR EKRLRQPRLG TRKLHNLMHT EPEVSVKVGR DRLFDILRDR RELVPRRRAY HKTTDSHHRF RRHPNLLKDG PIQVVAKAPE QVWVADITYL PTQTGVAYLS LITDAYSRKI VGHHVHESLH TESVIQAFNK ALKQRTTKQC LVHHSDRGVQ YCSELYQRLH AKYGITCSMT DGYDCYQNAL AERVNGILKN ELLLHRPKNF AEAIRMVDES VQIYNNERPH LSLKYKTPDA VHRAF
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