Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_0064 |
Symbol | katE |
ID | 3717704 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | - |
Start bp | 69108 |
End bp | 71249 |
Gene Length | 2142 bp |
Protein Length | 713 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | |
Product | hydroperoxidase II |
Protein accession | YP_345797 |
Protein GI | 77456292 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 34 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTACCA AGAAACCTGC CAATGACAAA AGCCAACTGG CCGGCACCGA TACCCCGGAT CGCGCCAACA CCAATGCCAA ACTCGACAGC CTGGAAAAAT TTCGCTCCGA CGCCACCGGC CAGGCCCTGC GCACCAATCA GGGCGTGAAG GTCGCGGACA ACCAGAACAC CCTCAAGGCC GGAGCTCGCG GGCCGTCGCT GCTGGAAGAC TTCATCATGC GTGAAAAGAT CACGCACTTT GACCATGAAC GGATCCCCGA GCGCATCGTC CACGCCCGCG GCACTGGCGC CCATGGTTTC TTTCAGAGCT ACGAGAACCA TTCGACGCTG ACCAAGGCCG GTTTCCTGCA GGATCCGGGG AAGAAAACCC CGGTGTTCGT GCGTTTTTCC ACAGTGCAGG GGCCGCGCGG TTCCGGCGAC ACCGTGCGTG ACGTGCGTGG TTTTGCCGTG AAGTTCTTCA CCGACGAAGG CAACTTCGAT CTGGTCGGCA ACAACATGCC GGTATTTTTC ATACAGGACG CGATCAAATT TCCCGACTTC GTCCATGCGG TAAAGCCCGA ACCGCATAAC GAGATCCCCA CTGGTGGCTC GGCTCACGAC ACCTTCTGGG ACTTCGTGTC GCTGGTGCCG GAATCGGCAC ACATGGTCAT CTGGGCCATG TCCGACCGGG CTATCCCGAA AAGCCTGCGC AGCATGCAGG GCTTCGGTGT GCACACCTTC CGGCTGATCA ATGCCGAGGG CAAATCGCGC TTCGTCAAAT TCCACTGGCG CCCTACCGCC GGCACCTGTT CTTTGGTGTG GGACGAGGCG CAAAAACTTG CGGGCAAAGA CACCGACTAC CATCGGCGCG ATCTCTGGGA AGCCATCGAA ATGGGCGACT ACCCGGAATG GGAACTCGGC GTTCAGGTCA TCGAAGAGGA AAACGAACAC GACTTCGATT TCGACATTCT CGACCCGACC AAGCTGATTC CCGAGGAAAT TGTTCCTATC ACGCCATTGG GCAAGATGAC CCTCAACCGC AACCCGGACA ACTTCTTCGC CGAAACCGAG CAGGTTGCGT TTTGCCCCGG CCATATCGTG CCGGGCATCG ACTTCTCCAA TGACCCACTG CTGCAAGGCC GGCTGTTTTC CTACACCGAC ACGCAGATCA GCCGACTCGG CGGGCCGAAC TTTCATGAGT TGCCGATCAA TCGCCCAGTG GCACCGTTCC ACAACGGCCA GCGCGATGCC CAGCACCGTA CGGTGATCGA CAAGGGGCGC GCCTCGTATG AACCCAATTC CATCGATGGC GGCTGGCCGA AAGAAACCCC ACCGGCTGCG CAGGACGGCG GGTTTGAAAG CTATCCGGAA CGCATCGACG CCAACAAGAT CCGCCAGCGC AGCGAGTCGT TCAGCGACCA CTTCTCCCAG GCGCGGTTGT TCTTCAACAG CATGAGCGCG CACGAGAAAG AGCACATCAT CGCCGCCTAC AGTTTCGAAC TCGGCAAGGT TGAGCGTGAA TTCATCCGGG CGCGGCAAGT GAACGAGATT CTCGCCAACA TCGATCTGGA GCTGGCCAAA CGCGTGGCGG CCAACCTGGG TCTGCCAGCG CCAGGCAAAG GCACCGTCGA CGTACCGAAA ACATCGCTGG ATCGCTCACC ATCGTTGAGT CAGGCCAACC TGTTGCCGGA GAACATCAAG ACACGAAAAG TCGCGATCCT TGCAGCCAAT GGTGTCGATG GTGCGGCAAT TGATGCGATG AAGAAGGCGC TGGCGGCAGA AGGTGCGCAC GCCAAACTGC TCGGCCCGAC CTCGGCGCCG GTGAAGACCG CCGATGGCAA AAGCCTGGCG GTGGATGCGT CGATGGAAGG TTTGCCTTCG GTGGCGTTCG ATGCGGTGTT CGTGCCGGGT GGCGCGGCGT CGGTCAAGGC GTTGAGCGGG GATGGCGTAG CGTTGCATTA CCTGCTGGAG GCGTACAAAC ACCTGAAGGC GATTGCGCTG CAGGGTGAGG CCAAGCAGTT GCTGGATGTG CTGAAGCTGG AGGCGGATGC CGGGCTACTG GAGGGCAAGG ATGTTGGCGC GCTGACCAAA CCATTCTTTT CTGCGATCGG GCAGCATCGG GTATGGGATA GGGAAGCCAA GGCCAAGGCG ATTCCGGCCT GA
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Protein sequence | MSTKKPANDK SQLAGTDTPD RANTNAKLDS LEKFRSDATG QALRTNQGVK VADNQNTLKA GARGPSLLED FIMREKITHF DHERIPERIV HARGTGAHGF FQSYENHSTL TKAGFLQDPG KKTPVFVRFS TVQGPRGSGD TVRDVRGFAV KFFTDEGNFD LVGNNMPVFF IQDAIKFPDF VHAVKPEPHN EIPTGGSAHD TFWDFVSLVP ESAHMVIWAM SDRAIPKSLR SMQGFGVHTF RLINAEGKSR FVKFHWRPTA GTCSLVWDEA QKLAGKDTDY HRRDLWEAIE MGDYPEWELG VQVIEEENEH DFDFDILDPT KLIPEEIVPI TPLGKMTLNR NPDNFFAETE QVAFCPGHIV PGIDFSNDPL LQGRLFSYTD TQISRLGGPN FHELPINRPV APFHNGQRDA QHRTVIDKGR ASYEPNSIDG GWPKETPPAA QDGGFESYPE RIDANKIRQR SESFSDHFSQ ARLFFNSMSA HEKEHIIAAY SFELGKVERE FIRARQVNEI LANIDLELAK RVAANLGLPA PGKGTVDVPK TSLDRSPSLS QANLLPENIK TRKVAILAAN GVDGAAIDAM KKALAAEGAH AKLLGPTSAP VKTADGKSLA VDASMEGLPS VAFDAVFVPG GAASVKALSG DGVALHYLLE AYKHLKAIAL QGEAKQLLDV LKLEADAGLL EGKDVGALTK PFFSAIGQHR VWDREAKAKA IPA
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