Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_0050 |
Symbol | |
ID | 3717486 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | - |
Start bp | 55155 |
End bp | 57245 |
Gene Length | 2091 bp |
Protein Length | 696 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | |
Product | putative diguanylate cyclase |
Protein accession | YP_345783 |
Protein GI | 77456278 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.315879 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.219682 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCGACG AAGCCCAGCG CTGGAAAGAG AAATACCTCA AAAGCATCGA ACAACAGGAA AAGCTCGAAC GTCGATGGGA CGCCCGGCTC GACCTGCTGC GCCGCGGCCT GGTGCGCAGC ACCCTGGCGG CGGAAGGCAC CGACCGCGTG GTCGATCAGT GCATGAAAGA GATGCGCGAC GTGGTGCGCA CCGATGACAT GGACGCCGGC CTCGCCGCCC TGCTGCCACG CCTGGAAAAA GCCGTGCTCG ATTCCGAGCA GCGCCGGGAA ACCCGGATCG AGCAGGTCAG CACCGCACTG ACTGCACTGG TCACTCAATT GCAATCCCTG CCGCTGCCCC GAGAAGTGGC CCAGCCGCTG AAGAAGTTCG CCAAGCAGCT GGACGGCCGG GTGAGTCAGG CAAGGGAAAT GCCGCTGCTG CTCAGCGAAC TCAGCGGCCT GCAGGGCAAG GCCTTGAGTC AGCTGGCGAC GCCGACGGAA CCGGGGCGTC CCGGGTTGTT GCAGCGCCTG TTCGGCAGCC GCGACAGCGA GGAAACCCCT GCTCAAGTGG CCCAGGCTCC TGCGGTGACT CCGTCAGTGC AGCCAGAGCA ACCACCCGTC ACACATGAAG CTGTGCCAGC GCCGCAAGCG CCTGTTACAA GCGCTGAACA GGTCGCCACT GCGCCCGTCA GCCCAGCGCT GATCGCCGCC CCCGTGGCCG AACCATCCAA AGCTCCAGAG CCAATCCCAG AAGACTTTAC AGAGCCGGAG GTGGTCGCAT TTGAGCCGGC CAGAATCCTC ACCGAAGCGC CCAGCGCTCC CAGCGAACCA GAACCCGTCG AGCCGGAATC AAAGCTGCAA CCCTTCACGC CTCCTCCGGT TTTCGCGCCG GCAGTGCCCA CGGCCATCAA CCCCGACGAG TTGATCCTCC CCGGCGATAC CCCTCCGCCC GTGATCCTCG ACAGCCTGCC CCTGCCCGAA CCCATCGCCC AGGCATTGGC CGCCATCGAT CCGGAACAAT CCGAGCATGA CATTCTCTAT GCCCTGCCGG ACTCGCCAGA GCCGTCCTAC AGCTCGGTCG CCCGACACAT CGAAGACACG CTGATTGGCT TGCTGGATGA CCTGACACTG CCGGAGCGCC ACCGCCCGCA AGCCGAAGCC ATGCGCGACC GGCTGAAAAA TGGCCTTAAC TGGTACGAAC TACTACCGAT CCTCGACGAT CTTGCGACAT TGATGCTGGC CATCACAGAC AGCGGCCAGC ACGAATTCGA AGCTTATCTG CAGCAACTCA ATGAACGCCT CGAGGCATTC CAGAGCAACT TGCAGGCTGC CAGCGAAGGA CACGCCGACA ACAGCTCCGC CGCGAGAGCA ATGGACACGC AGATCCGCGA ACAGGTCGAC GGCTTGCAGA CCAGCGTCCA GGAGGCGGCG GATCTGAATG ATCTCAAGCA AGTGCTGGAA AACCACCTCG AGGGCCTGCT CGGCACCATG GATCAGCACC AGAAGCAGCG CGACGCTCGG GAACAGGAAG TCGCCGGACG CCTGAAAAGC CTGGCCGAGC GCGTCGCGCA CATGGAGCAG GAAGCGCTGG GCTATCGCGA ACACCTCGAA GAGCAGCGCC AGAAAGCCCT GATCGATCCG CTCACCGGCC TGCCCAACCG CGCGGCCTGG ACCGAACGGC TCGAACATGA AATCGCCCAG TGGCAGCAGC ACGGCAACAC TCTGAGCCTG GCTATGCTCG ACCTCGATCA CTTCAAGCGG ATCAACGACA ACTACGGGCA CCTGGCCGGT GACAAGGTGT TGAAGATCAT CGCCACAGTC CTGCGCAAGC GTATGCGTGG CAACGATTTC ATCGCTCGTT TCGGCGGTGA GGAGTTTGTC CTGCTGCTTC CAGCCACCCC ACCAGCGGTC GGCGCCAAAC TCCTGGAAAA CCTACGCGCC TCCATCGAGG CCTGCCCGTT TCACTTCAAG GGCGAGCGCG TCACGATCAC GATCTCAATG GGACTGGCGG CGTTTCGGCC GGGAGAACAC AGCGATCTGG TGCTCAAAAG AGCCGATCAG GCGCTTTATC GGGCGAAAAA CGCGGGACGT AACCGGGTGG AGCTGGGCTG A
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Protein sequence | MSDEAQRWKE KYLKSIEQQE KLERRWDARL DLLRRGLVRS TLAAEGTDRV VDQCMKEMRD VVRTDDMDAG LAALLPRLEK AVLDSEQRRE TRIEQVSTAL TALVTQLQSL PLPREVAQPL KKFAKQLDGR VSQAREMPLL LSELSGLQGK ALSQLATPTE PGRPGLLQRL FGSRDSEETP AQVAQAPAVT PSVQPEQPPV THEAVPAPQA PVTSAEQVAT APVSPALIAA PVAEPSKAPE PIPEDFTEPE VVAFEPARIL TEAPSAPSEP EPVEPESKLQ PFTPPPVFAP AVPTAINPDE LILPGDTPPP VILDSLPLPE PIAQALAAID PEQSEHDILY ALPDSPEPSY SSVARHIEDT LIGLLDDLTL PERHRPQAEA MRDRLKNGLN WYELLPILDD LATLMLAITD SGQHEFEAYL QQLNERLEAF QSNLQAASEG HADNSSAARA MDTQIREQVD GLQTSVQEAA DLNDLKQVLE NHLEGLLGTM DQHQKQRDAR EQEVAGRLKS LAERVAHMEQ EALGYREHLE EQRQKALIDP LTGLPNRAAW TERLEHEIAQ WQQHGNTLSL AMLDLDHFKR INDNYGHLAG DKVLKIIATV LRKRMRGNDF IARFGGEEFV LLLPATPPAV GAKLLENLRA SIEACPFHFK GERVTITISM GLAAFRPGEH SDLVLKRADQ ALYRAKNAGR NRVELG
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