| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pfl01_0049 |
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| Symbol | |
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| ID | 3717485 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas fluorescens Pf0-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007492 |
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| Strand | - |
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| Start bp | 54274 |
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| End bp | 55053 |
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| Gene Length | 780 bp |
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| Protein Length | 259 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | |
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| Product | AmpD |
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| Protein accession | YP_345782 |
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| Protein GI | 77456277 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 0.2059 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.183302 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAAATTTT TTACCCTCCT CGCGTCGCTC CTCTTACTGG CCGGTTGTGC CAGCGGCCCG
CGTTTTGACA CCAGCCATCC TTCGGTCAAT CACGACAGTC GCGTGCAGTT TGTGATCGTG
CACTACACCT CCGCCTCGCT TGAACGCTCA CTGCAGTTGC TGACCCACGG CGAAGTCAGC
AGTCATTACC TGATCGGCGA CGACAAGAGC GCCACCATCT ACAAGCTGAT GGACGAAAAC
CTGCGGGCCT GGCATGCCGG AGAAAGCGAA TGGCAAGGCC GGACCTGGCT CAACTCCAGC
TCGATCGGTA TCGAGATCGT CAATCCGGGC TTCAAGGACA CACCGACCGG TCGCCTCTGG
TATCCCTACA GCGAAGCCCA GGTGCAATCG CTCATCGTTC TGCTCAAGGA CATCAGCAAA
CGCCAGGGCA TCAGCCCGCG CCACATCATC GGCCATAGCG ACATCGCCCC GTTGCGCAAG
CTCGACCCGG GGCCGCTGTT CCCCTGGAAG CGCCTGGCAG CCGAAGGGTT GGGGCTCTGG
CCCAATGAAC AAGCGGTGGC ACGCCAACAG GCGCAGTTCG ACGCCGAACT GCCGAGCATC
ACCTGGTTCC AGAGCCAACT GGCGCGCCTG GGCTACTCGA CGCCGCAGAC CGGCGAGCTG
GATGTGGCGA CCCGGCACGT GCTCGCGGCC TTCCAGATGC ACTACCGCCC TGCGCGCTTT
GACGGCACGC CGGATGCGCA AACGGCAGCG TTGCTGCTGG TGCTGAATCA GACAAAATAA
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| Protein sequence | MKFFTLLASL LLLAGCASGP RFDTSHPSVN HDSRVQFVIV HYTSASLERS LQLLTHGEVS
SHYLIGDDKS ATIYKLMDEN LRAWHAGESE WQGRTWLNSS SIGIEIVNPG FKDTPTGRLW
YPYSEAQVQS LIVLLKDISK RQGISPRHII GHSDIAPLRK LDPGPLFPWK RLAAEGLGLW
PNEQAVARQQ AQFDAELPSI TWFQSQLARL GYSTPQTGEL DVATRHVLAA FQMHYRPARF
DGTPDAQTAA LLLVLNQTK
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