Gene Pfl01_0043 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_0043 
Symbol 
ID3717479 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp48030 
End bp48494 
Gene Length465 bp 
Protein Length154 aa 
Translation table11 
GC content58% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_345776 
Protein GI77456271 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.332588 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGGGTT TAAAGACATT GGCAGCCGCC CTGCTCCTGG GCGGTAGTGC CATGGCGATG 
GCGGCCAATG ACGGCCAGGC GCGGGTCAAC GAACTGCTGA GTTCCGACCC GCAATACAGG
GAAACCTGGG AAGGCGTGGT GAAGAAGGAA GAACGCCTGC CGGAATGGGT AATGAACCTC
TCCGGCGCGC CGGACCAACA GATGAATGCC GTGACTGAAG ATGGCGATCA GTATCTGGTG
GGGCCGCTCT GCGAATCGCA GGACAAATGC CTCAACCACC GTCTGATCGT CGCCTTCAGC
TTCGACAAGA AACATGCTTA CGCCATGTTG GTCGATGTGC CCGAAGGACT GCCGGCCGAC
AAGTCGCCAA CGCGACATGC CACCTACCGC TTCCTCGGCA AGCCCGACCA GGGCATGCAG
GATCTGTTGA TGGAAACGCT GAAGAAAGAT CCGAACTGGT ATTGA
 
Protein sequence
MKGLKTLAAA LLLGGSAMAM AANDGQARVN ELLSSDPQYR ETWEGVVKKE ERLPEWVMNL 
SGAPDQQMNA VTEDGDQYLV GPLCESQDKC LNHRLIVAFS FDKKHAYAML VDVPEGLPAD
KSPTRHATYR FLGKPDQGMQ DLLMETLKKD PNWY