Gene Pfl01_0039 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_0039 
Symbol 
ID3717475 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp43104 
End bp44042 
Gene Length939 bp 
Protein Length312 aa 
Translation table11 
GC content62% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_345772 
Protein GI77456267 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.292682 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.178021 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAACCC GAGCCCATCA TGTATTGATC GGCCTGTTCA CGGTGATTGT GGTGGCAGGC 
GCCCTGCTCT TCGGTCTGTG GCTGGCCAAG TCCAGTGTCG ATACCGAGTT CAAGGATTAC
GAAGTCGTGT TCAACGAGGC GGTCAGCGGT CTGTCCCGGG GCAGTCCGGT GCAGTACAGC
GGGATCAAGG TCGGCGACGT GGTCAGCCTG CGCCTCGACC CGAAGGACCC GCGTCGAGTG
CTGGCACGGA TTCGCCTGGC TGGCGACACG CCGGTCAAGG AAGACACCGA GGCCAAACTG
GCCTTGGCCG GGATCACCGG CACCTCGATC ATCCAGCTCA GCGGGGGCAC GCCGCAAAGC
TCGAAACTCA AGGGCCATGA CGGCAACCTG CCGACCATCG TCGCCTCACC TTCGCCCATT
TCGCGGCTGC TCAGCGACAG CAACGATTTG ATGAGCGGGG TCACGACGTT GCTCAGTAAT
GCCAATCAGA TGTTCTCTGC CGACAACATC GAGCGCGTGA GCAAGACCCT CGAGCATCTG
GAGCAGACCA CTGGCTCGAT CAACGATCAG CGCGGCGACC TGCGTCAGGC CATGCAGCAA
CTGGCGACGG TCGGCAAACA GGCGGGCAAC ATGCTTGAAC AGACGTCCGC GTTGATGCGC
AACGCCAACG GCCTGCTCAA CGATCAGGGC AAACAGGCGC TCGGCAGTGC CGAACAGGCG
ATGAAATCCC TGGAGCAAAG CAGCGTCACC ATCAACGGCC TGCTCAGCAA GAATCAGAAT
TCCCTCGACA GCGGCATGCA GGGCCTCAAC GGCCTGGCCC CGGCGATCCG CGAACTGCGC
GAAACCCTGA ACTCGCTGCG CGCCATTTCC CAACGCCTGG AGGCCAACCC CAGCGGTTAC
CTGCTGGGCA GTGACAAGAA CAAGGAGTTC ACGCCATGA
 
Protein sequence
METRAHHVLI GLFTVIVVAG ALLFGLWLAK SSVDTEFKDY EVVFNEAVSG LSRGSPVQYS 
GIKVGDVVSL RLDPKDPRRV LARIRLAGDT PVKEDTEAKL ALAGITGTSI IQLSGGTPQS
SKLKGHDGNL PTIVASPSPI SRLLSDSNDL MSGVTTLLSN ANQMFSADNI ERVSKTLEHL
EQTTGSINDQ RGDLRQAMQQ LATVGKQAGN MLEQTSALMR NANGLLNDQG KQALGSAEQA
MKSLEQSSVT INGLLSKNQN SLDSGMQGLN GLAPAIRELR ETLNSLRAIS QRLEANPSGY
LLGSDKNKEF TP