Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_0039 |
Symbol | |
ID | 3717475 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | + |
Start bp | 43104 |
End bp | 44042 |
Gene Length | 939 bp |
Protein Length | 312 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | |
Product | hypothetical protein |
Protein accession | YP_345772 |
Protein GI | 77456267 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 0.292682 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.178021 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAAACCC GAGCCCATCA TGTATTGATC GGCCTGTTCA CGGTGATTGT GGTGGCAGGC GCCCTGCTCT TCGGTCTGTG GCTGGCCAAG TCCAGTGTCG ATACCGAGTT CAAGGATTAC GAAGTCGTGT TCAACGAGGC GGTCAGCGGT CTGTCCCGGG GCAGTCCGGT GCAGTACAGC GGGATCAAGG TCGGCGACGT GGTCAGCCTG CGCCTCGACC CGAAGGACCC GCGTCGAGTG CTGGCACGGA TTCGCCTGGC TGGCGACACG CCGGTCAAGG AAGACACCGA GGCCAAACTG GCCTTGGCCG GGATCACCGG CACCTCGATC ATCCAGCTCA GCGGGGGCAC GCCGCAAAGC TCGAAACTCA AGGGCCATGA CGGCAACCTG CCGACCATCG TCGCCTCACC TTCGCCCATT TCGCGGCTGC TCAGCGACAG CAACGATTTG ATGAGCGGGG TCACGACGTT GCTCAGTAAT GCCAATCAGA TGTTCTCTGC CGACAACATC GAGCGCGTGA GCAAGACCCT CGAGCATCTG GAGCAGACCA CTGGCTCGAT CAACGATCAG CGCGGCGACC TGCGTCAGGC CATGCAGCAA CTGGCGACGG TCGGCAAACA GGCGGGCAAC ATGCTTGAAC AGACGTCCGC GTTGATGCGC AACGCCAACG GCCTGCTCAA CGATCAGGGC AAACAGGCGC TCGGCAGTGC CGAACAGGCG ATGAAATCCC TGGAGCAAAG CAGCGTCACC ATCAACGGCC TGCTCAGCAA GAATCAGAAT TCCCTCGACA GCGGCATGCA GGGCCTCAAC GGCCTGGCCC CGGCGATCCG CGAACTGCGC GAAACCCTGA ACTCGCTGCG CGCCATTTCC CAACGCCTGG AGGCCAACCC CAGCGGTTAC CTGCTGGGCA GTGACAAGAA CAAGGAGTTC ACGCCATGA
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Protein sequence | METRAHHVLI GLFTVIVVAG ALLFGLWLAK SSVDTEFKDY EVVFNEAVSG LSRGSPVQYS GIKVGDVVSL RLDPKDPRRV LARIRLAGDT PVKEDTEAKL ALAGITGTSI IQLSGGTPQS SKLKGHDGNL PTIVASPSPI SRLLSDSNDL MSGVTTLLSN ANQMFSADNI ERVSKTLEHL EQTTGSINDQ RGDLRQAMQQ LATVGKQAGN MLEQTSALMR NANGLLNDQG KQALGSAEQA MKSLEQSSVT INGLLSKNQN SLDSGMQGLN GLAPAIRELR ETLNSLRAIS QRLEANPSGY LLGSDKNKEF TP
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