Gene Pfl01_0038 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_0038 
Symbol 
ID3717474 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp42299 
End bp43102 
Gene Length804 bp 
Protein Length267 aa 
Translation table11 
GC content67% 
IMG OID 
ProductABC transporter-like 
Protein accessionYP_345771 
Protein GI77456266 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.328477 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.303335 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGTCGTC TACCCCGCAC GCCCTCCGAG GCGGTGATCG AAGTTCGTGG CCTGTGCAAT 
CGCTTCGGCC ACCAGAGCGT GCACGAGAAC CTCGACCTCG ACTTGTACAA AGGCGAGATC
CTGGCCGTGG TCGGCGGTTC CGGCAGCGGC AAGTCGGTGC TGCTGCGCAG CATCGTCGGC
CTGCGCCGGC CCAGCGAAGG CATGGTCAAG GTGTTCGGCC AGAACCTGCC GAGCCTGCCG
GAGCATGAGC GTTCGCTGAT CGAGCGGCGC TTCGGTGTGC TGTTCCAGAA GGGCGCGCTG
TTCTCGTCGC TGACCGTCAC CGAGAACGTC GCCCTGCCCC TCATCGAACA CGCCGGGCTG
AGCCGCGACG ACGCCGAACA TCTGGCGGCA GTGAAGCTGG CGCTGGCCGG GCTGCCGCTG
TCGGCGGCGG ACAAGTACCC GGCCTCACTG TCCGGCGGCA TGATCAAGCG CGCGGCGCTG
GCCCGGGCGC TGGCGCTGGA TCCGGACATC CTGTTTCTCG ACGAACCCAC CGCCGGCCTC
GATCCGATTG GCGCGGCGCA GTTCGACCAA TTGATCCTGA CCCTGCGCGA CGCGCTGGGC
CTGAGCGTGT TTCTGGTGAC CCACGACCTC GACACGCTCT ACACCATCAC CGACCGCGTC
GCGGTACTGG CGCAGAAGAA AGTGCTGGTG GCGGGCCCCA TCGACGTGGT CTCGGAAACC
GACGACGCGT GGATTCACGA ATACTTCCAC GGCCCTCGCG GCCGCTCGGC GCTGGACGCC
GCCACACAGC TCAACGAGGT CTGA
 
Protein sequence
MSRLPRTPSE AVIEVRGLCN RFGHQSVHEN LDLDLYKGEI LAVVGGSGSG KSVLLRSIVG 
LRRPSEGMVK VFGQNLPSLP EHERSLIERR FGVLFQKGAL FSSLTVTENV ALPLIEHAGL
SRDDAEHLAA VKLALAGLPL SAADKYPASL SGGMIKRAAL ARALALDPDI LFLDEPTAGL
DPIGAAQFDQ LILTLRDALG LSVFLVTHDL DTLYTITDRV AVLAQKKVLV AGPIDVVSET
DDAWIHEYFH GPRGRSALDA ATQLNEV