Gene Pfl01_0034 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_0034 
Symbol 
ID3717653 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp36849 
End bp38507 
Gene Length1659 bp 
Protein Length552 aa 
Translation table11 
GC content64% 
IMG OID 
ProductNa/Pi cotransporter II-like 
Protein accessionYP_345767 
Protein GI77456262 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.148674 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.215998 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTCACCC TGCTCAATTT GCTGTCTGCC GTGGCCCTGC TGATCTGGGG CACGCACATC 
GTTCGTACCG GCATCCTGCG GGTGTACGGC ACCAATCTGC GCCACGTGAT CGGCCAGAAC
ATGTCCAGGC GCTGGCTGGC CTTTGTCGCC GGCATCGTTG TCACTGCGAT GGTGCAGAGC
AGCAACGCCA CCGCCATGCT CGTGACGTCC TTTGTCGGTC AGGGCCTGAT GGCGTTGACC
CCGGCCCTGG CGACCATGCT CGGTGCCGAT GTCGGTACGG CGCTGATGGC GCGGGTGCTG
ACGTTCGACC TGTCGTGGCT GTCGCCGCTG CTGATTTTTA TCGGGGTGAT TTTCTTTCTG
TCGCGCAAAC AGACCCGGCT CGGGCAGATG GGCCGCGTGT CCATTGGGCT TGGGCTGATC
ATTCTGGCGC TGCAATTGAT CGTCGAGGCC GCTGCGCCGA TCACCCATGC CCAAGGGGTG
AAGGTGATTT TCGCGTCGCT GACTGGCGAT ATCCTGCTCG ACGCTCTGGT GGGCGCGCTG
TTCGCGATGA TTTCCTACTC CAGTCTGGCG GCCGTGCTGC TGACCGCCAC GCTCGCCGGC
GCTGCGGTGA TCAGTCTGCC GGTGGCGATC GGTCTGGTGA TTGGTGCCAA CATCGGCAGC
GGCGTGCTGG CGTTCATGAG CACCAGCATG CAGAACGCCG CCGGCCGGCA GGTGGCGCTG
GGCAGCCTGC TGTACAAACT GATCGGGCTG CTGCTGATCA TTCCGGTGCT CGACCCGCTG
GTGCACTGGA TCGACAGCCT GGATTTCAGC CCCCAGGAAA TGGTCATCGG CTTCCATCTG
CTCTACAACA CCGCGCGCTG CCTGATCCTG CTCCCGAGCG TCGGCCCGAT GGCGCGGCTG
TGTGCCTGGC TGCTGCCGGA GCGCCCCGAG GTCAATGGCA CCGCCAAGCC CCGTCACCTT
GATCCCACCG CGCTGGTCAC GCCGAGTCTG GCGCTGGCCA ACGCCGCCCG GGAAACCCTG
CGCATGGGCG ACCTGATCGA CAACATGCTC GACGCGACCC TCGACGTGCT GCGCGGCAAG
CAGACCGCCG TCACCCAGGA AATGCGCAAG CTGACCGATG ATGTCGAAGC GCTGTACAGC
GCGATCAAGC TGTACCTGGC GCAGATGCCC CGCGAGGATC TCGGCGAACA GGACAGTCGG
CGCTGGGCGG AAATTATCGA GCTGGCGATC AACCTTAAAC TCGCCAGCGA CCTGATCGAA
CGCATGCTGC GCAAGGTGCA GCAGCAGAAG ACTTCGCAAC GCCGGTCGTT TTCCGAAGAC
GGGCTGGAAG AATTGGCCGG CCTGCACCAG CAATTGATCG CCAACCTGCG GCTCGGGCTG
TCGGTGTTCC TCAGCGGCGA CAAGGAGAGC GCCCGCCAGT TGCTGCGCGA GAAACGGCGC
TTTCGCGCAC AGGAACGACG TCTGGCCCAC GCCCATGTCA GCCGGTTGCA ACGCAAGATC
GTGCAGAGTA TCGAGACCAG TTCGTTGCAC CTGGAGTTGA TTGCCGACAT GAAACGCCTG
AACTCGCTGT TCTGCAGCAG CGCCTATGTG GTGCTGGAAA CTTCCGATAC CGGCGCGCTG
GCGGCGGACG ATATGGCGGA CATCACGCAT TCGCCTTGA
 
Protein sequence
MLTLLNLLSA VALLIWGTHI VRTGILRVYG TNLRHVIGQN MSRRWLAFVA GIVVTAMVQS 
SNATAMLVTS FVGQGLMALT PALATMLGAD VGTALMARVL TFDLSWLSPL LIFIGVIFFL
SRKQTRLGQM GRVSIGLGLI ILALQLIVEA AAPITHAQGV KVIFASLTGD ILLDALVGAL
FAMISYSSLA AVLLTATLAG AAVISLPVAI GLVIGANIGS GVLAFMSTSM QNAAGRQVAL
GSLLYKLIGL LLIIPVLDPL VHWIDSLDFS PQEMVIGFHL LYNTARCLIL LPSVGPMARL
CAWLLPERPE VNGTAKPRHL DPTALVTPSL ALANAARETL RMGDLIDNML DATLDVLRGK
QTAVTQEMRK LTDDVEALYS AIKLYLAQMP REDLGEQDSR RWAEIIELAI NLKLASDLIE
RMLRKVQQQK TSQRRSFSED GLEELAGLHQ QLIANLRLGL SVFLSGDKES ARQLLREKRR
FRAQERRLAH AHVSRLQRKI VQSIETSSLH LELIADMKRL NSLFCSSAYV VLETSDTGAL
AADDMADITH SP