| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pfl01_0018 |
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| Symbol | |
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| ID | 3717637 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas fluorescens Pf0-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007492 |
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| Strand | + |
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| Start bp | 20177 |
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| End bp | 21202 |
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| Gene Length | 1026 bp |
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| Protein Length | 341 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | |
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| Product | peptidoglycan-binding LysM |
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| Protein accession | YP_345751 |
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| Protein GI | 77456246 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.0000019767 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGGAAAT CACTACTCGC CCTGCTGTTT CTGGCCTCGG CCGGCGCCGC GCACGGGCAA
GTGCAACTCA AGGAAGGTTT TCCACAGCAA TACACGGTGG TTTCGGGGGA TACGCTCTGG
GACATCTCCG GAAAATATTT GCGCGAACCC TGGCAGTGGC CACAGCTGTG GCGGGCCAAT
CCGCAGATCG AAAACCCCAA CCTGATCTAC CCCGGCGACA CACTGACGCT CAGTTACGTC
AACGGTCAGC CGCGCCTGAC CGTCAATCGC GGCGAGTCGC GCGGCACCAT CAAGTTGTCG
CCGCGCATCC GTACCAGCCC GGTGGCCGAG GCGATTCCGA GCATTCCGCT CAAATCGATC
AACAGCTTTC TGCTGAGCAA CCGCATCGTC GACAAGGTCG AGGACTTCGA CAAGGCGCCG
TACATCGTCG CCGGCGATGC CGAGCGGGTG CTCAGCGGCA CCGGCGACCG GATCTTCGCC
CGTGGCCATT TCGACCCGAA CCAGCCGGTC TACGGCATCT TCCGCCAGGG CAAGGTCTAC
ACCGATCCGC AGACCAAGGA GTTTCTGGGG ATCAACGCCG ACGACATCGG CGGCGGCGAA
ATCGTCGCCA CTGAAGGGGA CGTCGCCACC CTCGCCCTGC AACGCACGAC CCAGGAAGTG
CGCCTCGGCG ACCGCTTGTT CAGTGGCGAA GAGCGTTCGA TCAACTCGAC CTTCATGCCC
AGCGCTCCCA CCACTGACAT CAACGGCCTG ATCATCGATG TGCCGCGCGG CGTCACACAA
ATCGGCGCGA TGGACGTGGT GACCCTGAAC AAGGGCAAAC GCGACGGCCT GGCCGAGGGC
AACGTGCTGG TGGTGATGAA AACCGGGGAA ACCGTGCGTG ACCGGATCAC CGGCCAACCC
CTGAAAATCC CCGATGAGCG CGCCGGCTTG CTGATGGTGT TCCGCACCTA CGACAAACTC
AGTTACGGCC TCGTGCTGAA CGCATCGCGC TCGCTCGCGG TGCTGGACAA GGTGCGAAAT
CCTTAG
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| Protein sequence | MRKSLLALLF LASAGAAHGQ VQLKEGFPQQ YTVVSGDTLW DISGKYLREP WQWPQLWRAN
PQIENPNLIY PGDTLTLSYV NGQPRLTVNR GESRGTIKLS PRIRTSPVAE AIPSIPLKSI
NSFLLSNRIV DKVEDFDKAP YIVAGDAERV LSGTGDRIFA RGHFDPNQPV YGIFRQGKVY
TDPQTKEFLG INADDIGGGE IVATEGDVAT LALQRTTQEV RLGDRLFSGE ERSINSTFMP
SAPTTDINGL IIDVPRGVTQ IGAMDVVTLN KGKRDGLAEG NVLVVMKTGE TVRDRITGQP
LKIPDERAGL LMVFRTYDKL SYGLVLNASR SLAVLDKVRN P
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