| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pfl01_0008 |
|---|
| Symbol | |
|---|
| ID | 3717576 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas fluorescens Pf0-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007492 |
|---|
| Strand | - |
|---|
| Start bp | 10277 |
|---|
| End bp | 10810 |
|---|
| Gene Length | 534 bp |
|---|
| Protein Length | 177 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | |
|---|
| Product | D,D-heptose 1,7-bisphosphate phosphatase |
|---|
| Protein accession | YP_345741 |
|---|
| Protein GI | 77456236 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 3 |
|---|
| Plasmid unclonability p-value | 0.000000000567724 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGAAACTGC TGATTCTCGA TCGGGACGGA GTGATCAATT ACGACTCCGA CGCTTACATC
AAGTCGGTGG AGGAGTGGAT TCCGCTGCCC GGCTCGATCG AAGCGATTGC GCAGTTGAGC
AAGGCCGGCT GGACGGTGGC GGTCGCCACC AACCAGTCGG GCATTGCTCG CGGCTACTAC
GACCTCGCCA CCCTCGATGC CATGCACGCG CGCCTGCGCG AACTGGTGGC GGAGCAGGGC
GGTGAAGTCG GGCTGATCGT GTATTGCCCG CATGGGCCGG ACGAGGGTTG CGACTGCCGC
AAGCCGAAAC CGGGGATGTT GAGAACCATC GCGCAGCATT ACGACGTCGC GCTGACGAAT
GTCTGGTTCG TCGGCGACAG CCTTGGTGAC CTGGAGGCCG CCAAAGCCGT CGATTCACAG
CCCGTTTTGG TAAAGACCGG GAAAGGCGAA AAGACTCAGG CCAAGACCTT GCCGGTGGGC
ACCCTGATTT TTGACGATCT CGCGGCGATT GCCGCAGAAC TTATCCACAA CTAG
|
|---|
| Protein sequence | MKLLILDRDG VINYDSDAYI KSVEEWIPLP GSIEAIAQLS KAGWTVAVAT NQSGIARGYY
DLATLDAMHA RLRELVAEQG GEVGLIVYCP HGPDEGCDCR KPKPGMLRTI AQHYDVALTN
VWFVGDSLGD LEAAKAVDSQ PVLVKTGKGE KTQAKTLPVG TLIFDDLAAI AAELIHN
|
|---|
| |