| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSP_4238 |
|---|
| Symbol | traG |
|---|
| ID | 3711869 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodobacter sphaeroides 2.4.1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007490 |
|---|
| Strand | + |
|---|
| Start bp | 81837 |
|---|
| End bp | 85247 |
|---|
| Gene Length | 3411 bp |
|---|
| Protein Length | 1136 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 640069556 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_345423 |
|---|
| Protein GI | 77404851 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG3773] Cell wall hydrolyses involved in spore germination |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 0 |
|---|
| Plasmid unclonability p-value | 0.192526 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCAGTGGG AAATCTACAC GACCGGCGGC GCCTTCTATC TCTATGACGT GTTCCAGATG
CTCGGGGCCT ACACCTCCTC GGGCAACTTC AAGAACCTCC TCGCCATCGG GACGATCATC
GGCATCGGCT GGGCGTCGCT GCAGCTGGCC TTCGGCGGCA GCCTCGGCTC CGCCATGAAA
TATGTGCTGA CCATGATGCT CGTCATGATG TTCACCCTCG GCCCGAAATC CTCGGTGGTC
ATCATCGACA AGACCAGCGG AACGGTGCCC ATCTACGGGG TCGTGGACAA TGTGCCGACG
CCGGTGGCGA TGCTCGGGCA CTACACCTCG GCCGTGAGCT ACTACCTGAC CGGGCAGATG
GAAACGCTCA TGTCCACGCC CACGAACCTC ACCTACCAGA AGAACGGGAT CCTCTTCGGC
GCCACCCTCC TGTCGCAGGC CGCGAACTGG CGGGCGGTCA CGCCAAAGAT CCACGAGAAC
CTGGTCAACT ATATGCAGAA CTGCGTTCTC GACGCGGCAG CGCTCGGACA CATGGAGCTC
GAAATGGTGG CCACGACCGG CAACCTCGAG AGCTACATCG CCTCGAACAT GCCGGCCTCG
ATGGCCTATT ACGACGTGGT GAAGGGCGCG ACGCGCAAAT GCTCCGAGGG CTGGGCGAAC
GTCCGGGCCG CCGTGACCAC CGACGTGAAC AAGGTGTTCG CGCGCAAGGC GGCCGGGATC
TTCCAGGGCG TCAATTCCTC GGGCGCAGCC AACGTGAACC GGCTGAAGGG CACGCTGAGC
GACTTCCAGC AGCTCATGGC CATGTCCTCG GCCTCGTCCG TGCAAACCGT GAAGCAGGCC
ATGTATGTCA CGGCCATGGA CGACGGGATG AAGCGCTTCA TCGCCAACTC GGGCAACTCG
GCTGCGATGG AGATCTATCA GGCGACCCGC GCCGAGATCC AGACGCGCTC GAGCTATGCC
GCCATCGGCG CCAGCGCCGC CAAATGGGTG CCGCTCCTGA AGATCGTCTT CGAGACGCTC
TATTACGCCG CCTTCCCGAT GGCCGTCCTC ATGATGATGA CCCCGCTCGC CATGACCGTG
CTCAAGGGCT ATGCCGGCGG CTTCGTCTGG ATCGCGGCTT GGGAGCCCTT GAGCGCGATC
CTGCATTCGG TCGTCATCAA GGCCTCCACC GGCTTCTACC GCGAGGCGGG GGCGGTCACC
TCGGACGGAT CGGTGAGCGA CGTGGTGCTT TCATGGGCGA ACCACTTCGG GATCCGGGCA
GTCGAGCAGG ATGTGGGCAG CGTCGCGGGC TACCTCATGA TGTCGGTGCC GTTCCTCGCG
ACGGCCATCC TGTTCGGCGC CAACCGCATG GTGGGCATGG CGACCTCGAT GCTGAACGTG
GGGCAGGGGG CCGCAATCGA GTCCGGGCGC GAGGCCGCAA CCGGCGCGAT CAGCCTCGGC
AACATGTCCA TGAACAACTA CGCGGCCAAC AAGATGAACC TCTCGAGCAT GTGGGACGTC
GGCCGGGACA GCATGGTGGG AGACAACGGC GCGGTCATCA CGCAGAACGC GGACGGGCGC
TACAACTGGG CCGCCGGCAC CGCCGTCTCC TCCGGCGCCA TGACCTCGCA GTTCGGAGAA
GCCGTCCGGT CCGAAGTCAG CCGCCGCGCC GAAAGCTCGC GCACCGCCGC CTCAAGCGCG
GCTTCCGAGC TCTCGGACTA CATCAGCCAG GGGGCATCCG AGATCAACAG CTTCGGGCAG
AGCTTCACCA GCGGGAAGAT GGCAAACAAG GGATATGCCA CTGATTCACA AGCGACAGAG
ACAACAAGGG TCGCGGAGTC GTTCAAGCGA GTTGAGGACT TTGCGCGCGA TCATGGCATC
TCGACCGACG TCGCAATAGG CGCCGGCATC GCCGCTCACC TTCAAGCGAA GGCGGGAGGA
GCACTAGGAT CAGCTATCTC TAGCTTGACC GGTCTGGAGG CCGGTGCAAG CGCCTCTCTG
TCGGGCAATC TGGGAGCCAA ATCCGACGAA CGGTTCAGTG AAATCGTTAA GGCTGCCACA
AGTGCTGGCA TTGACAAAGA CGTGAGCACA ATCAACTCGG CGCGCTACTC GGCCAGCTCC
TCTGACACGC ATGGCCGCCA GACCACGGCG GGAGAGGACC GGCGCTTCAG CTTGGACGAA
GGTGAACGCC TGGCGGAAAG TTACATTTCG AGACTGGAGG AGGCCAAATC TTATTCGGAA
GCGGAGAGCC GGTTGAAGTC TGGTGGCACC TCTCTCGACA TGAACCTCAA TCAGATGATC
GGCAACGAAC TGGTCCGCGG TGGCCACAAC CCGCTCGAAG TAAGCGACTT CTTCAATCCG
AAAACAGGCG CGGCCATGGG AGAAGGCAAG CAGATCGTCG GCCGCGTGGT GGACGACCTC
GTAAACGGTC TGGTCGGGCC CGGGCCCCAA GATCGCACAC AAGACTACGA GGTGCAGGTC
GATCAGAGCG CCTTCCGCAA GGATCTGCCC CGCGAAGCTA CTCTTGATGC AGGCACGCCA
AATGCGCGAT CAATTTCGCT CGATGCTCAG CGCAGCTCTG TCGATGGAGC GATTGGCCAA
GCTGAAAGCG ATGCGCAAGG CGACCATCTC AACCTTACCC GCTACCATGG TGACAAGGTG
AGGGAGGAAA ATCCGCTGCT CGAATCCAAC CGGTCTGCTC TGGCCAGTGG CGCTGAGCAG
ACGATTGGGG AGGCCGGCTA CAAGCGCGTG TTTGGTTGGC TGAACGTTGG CGCCGCCGAG
GCGGCAGAGC TGCAGCAGGC ACATCCTGCC GCTTGGACGT CGCCAGGCGC GGCTTTGGAT
TACTACAGTC AGAACCCGGA AAAATTCATG GAGGTGCTCG GCCGCCCTTT CGTTGATGGC
GACGACTTGC CCTCGTCGCC GGATAACCAG AATGCGGCCC TGTATCCCTC GCCGATGCTG
CCGAGAGCAT ACTCAGCGCA GGAGCGGGAC GTCATGGTGC GCACCATCCT CGGCGAGGCC
GCCGATCAGG GCAATGTCGG CATGGCGGCA GTTGCGCTAG TAATCCGCAA CCGTGCGGAA
GACGTCAGGT TTCCCGACAA CGTGGCAGAC GTCAGCCTGC AGCCACGCCA GTTCTCTGCC
TGGAACGCGG ACGGATCAGG GAACGCTCTC GTCGCCAAAT ACAACCCCGG CGAGGCGGCT
TATGAGCGCG CCGCCTACGT TGCCGATCTC GTGATGGCCG GGCTGGTTCC CGACTTTACT
GAAGGCGCCA CGCACTACTA CTCACCGGCC GGAATGAACC ATCTGGTGGA AAGCGGCTAC
CAGAAAAACC TCATCCCGTC CTGGCTCGCC CGTGAGACGG AAGCTCGTGA TGCTCCGCCG
ATACGCATCG GCGGGCACAT TTTCACAGGC TCGGTTCGGA TTGACAGATG A
|
|---|
| Protein sequence | MQWEIYTTGG AFYLYDVFQM LGAYTSSGNF KNLLAIGTII GIGWASLQLA FGGSLGSAMK
YVLTMMLVMM FTLGPKSSVV IIDKTSGTVP IYGVVDNVPT PVAMLGHYTS AVSYYLTGQM
ETLMSTPTNL TYQKNGILFG ATLLSQAANW RAVTPKIHEN LVNYMQNCVL DAAALGHMEL
EMVATTGNLE SYIASNMPAS MAYYDVVKGA TRKCSEGWAN VRAAVTTDVN KVFARKAAGI
FQGVNSSGAA NVNRLKGTLS DFQQLMAMSS ASSVQTVKQA MYVTAMDDGM KRFIANSGNS
AAMEIYQATR AEIQTRSSYA AIGASAAKWV PLLKIVFETL YYAAFPMAVL MMMTPLAMTV
LKGYAGGFVW IAAWEPLSAI LHSVVIKAST GFYREAGAVT SDGSVSDVVL SWANHFGIRA
VEQDVGSVAG YLMMSVPFLA TAILFGANRM VGMATSMLNV GQGAAIESGR EAATGAISLG
NMSMNNYAAN KMNLSSMWDV GRDSMVGDNG AVITQNADGR YNWAAGTAVS SGAMTSQFGE
AVRSEVSRRA ESSRTAASSA ASELSDYISQ GASEINSFGQ SFTSGKMANK GYATDSQATE
TTRVAESFKR VEDFARDHGI STDVAIGAGI AAHLQAKAGG ALGSAISSLT GLEAGASASL
SGNLGAKSDE RFSEIVKAAT SAGIDKDVST INSARYSASS SDTHGRQTTA GEDRRFSLDE
GERLAESYIS RLEEAKSYSE AESRLKSGGT SLDMNLNQMI GNELVRGGHN PLEVSDFFNP
KTGAAMGEGK QIVGRVVDDL VNGLVGPGPQ DRTQDYEVQV DQSAFRKDLP REATLDAGTP
NARSISLDAQ RSSVDGAIGQ AESDAQGDHL NLTRYHGDKV REENPLLESN RSALASGAEQ
TIGEAGYKRV FGWLNVGAAE AAELQQAHPA AWTSPGAALD YYSQNPEKFM EVLGRPFVDG
DDLPSSPDNQ NAALYPSPML PRAYSAQERD VMVRTILGEA ADQGNVGMAA VALVIRNRAE
DVRFPDNVAD VSLQPRQFSA WNADGSGNAL VAKYNPGEAA YERAAYVADL VMAGLVPDFT
EGATHYYSPA GMNHLVESGY QKNLIPSWLA RETEARDAPP IRIGGHIFTG SVRIDR
|
|---|
| |