| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSP_4191 |
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| Symbol | bhpP |
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| ID | 3711979 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodobacter sphaeroides 2.4.1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007490 |
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| Strand | + |
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| Start bp | 41195 |
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| End bp | 44137 |
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| Gene Length | 2943 bp |
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| Protein Length | 980 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640069517 |
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| Product | diguanylate cyclase/phosphodiesterase with phytochrome (GAF) sensor |
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| Protein accession | YP_345384 |
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| Protein GI | 77404812 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain
[COG2200] FOG: EAL domain
[COG4251] Bacteriophytochrome (light-regulated signal transduction histidine kinase) |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTGCTGGC CGGCGCCGCC GCGACCTTCA CGGCGCTCCT CGAATGGTTC ACCCCTTTTG
TGGCAGCCCG GCGGGTATGA CCGCCCTCCG CCGCCATGCA GGTCTTTGCC GCACGTTTGC
CAGAACTTCG TTGTGCGGGG GTGCCTCATG ACGATCTCTG GGGGCACCTT CGACCCTTCG
ATCTGCGAGA TGGAACCGAT CGCCACGCCC GGCGCGATCC AGCCGCACGG AGCGCTGATG
ACCGCGCGGG CCGACAGCGG CCGCGTCGCC CATGCCAGCG TCAACTTGGG CGAGATCCTC
GGCCTGCCCG CGGCCTCGGT TCTGGGGGCG CCCATCGGAG AGGTGATCGG GCGCGTCAAC
GAGATCTTGC TGCGCGAGGC GCGTCGTAGC GGCTCCGAGA CGCCGGAAAC AATCGGGTCC
TTCCGCAGAA GCGACGGACA GCTGCTGCAT CTCCATGCGT TCCAGTCGGG CGACTACATG
TGCCTCGACA TCGAGCCGGT GCGCGATGAG GATGGCCGGC TCCCTCCGGG AGCCAGGCAA
TCGGTTATCG AGACCTTCTC CAGCGCCATG ACGCAGGTGG AACTCTGCGA GCTCGCGGTT
CACGGGCTGC AGCTGGTGCT GGGCTATGAC CGGGTGATGG CCTATCGCTT CGGCGCTGAC
GGACATGGCG AGGTTATCGC CGAGCGGCGC CGGCAGGATC TCGAGCCTTA CCTGGGCTTG
CACTACCCGG CATCGGACAT TCCGCAAATC GCGCGCGCGC TCTACCTGCG CCAGAGGGTG
GGTGCCATTG CGGATGCGTG CTACCGGCCG GTTCCGTTGC TCGGCCATCC CGAGCTCGAC
GACGGCAAGC CCCTCGACCT GACGCACAGT TCGCTGCGCA GCGTCTCGCC GGTCCATCTC
GACTACATGC AGAACATGAA CACGGCGGCC AGCCTGACCA TCGGGCTGGC CGACGGCGAC
AGGCTGTGGG GGATGCTGGT CTGCCACAAC ACGACCCCCC GTATTGCCGG CCCCGAGTGG
CGTGCGGCGG CGGGCATGAT CGGGCAAGTG GTCTCGCTGC TCCTGAGCCG GCTGGGCGAG
GTCGAGAATG CCGCCGAGAC ACTGGCCCGG CAGTCGACGC TCTCGACGCT GGTCGAACGG
CTATCGACCG GTGATACGCT GGCTGCGGCA TTTGTCGCGG CAGATCAGCT GATCCTCGAT
CTGGTCGGAG CCAGTGCCGC GGTCGTGCGG CTGGCTGGAC AGGAATTGCA CTTCGGGCGG
ACGCCGCCGG TCGATGCGAT GCAGAAGGTC CTGGACAGTC TGGGTCGCCC CTCGCCCCTG
GAGGTGCTGT CCCTCGACGA CGTCACCCTG CGCCATCCCG AGCTGCCAGA GCTGCTGGCG
GCCGGAAGCG GCATCCTGCT GCTCCCCCTG ACATCCGGGG ACGGAGATCT GATCGCCTGG
TTCCGCCCTG AGCATGTGCA GACGATCACC TGGGGTGGCA ATCCGGCCGA ACATGGCACT
TGGAACCCGG CAACGCAGCG GATGAGACCG CGCGCCTCGT TCGACGCCTG GAAGGAGACA
GTCACCGGCC GCTCGCTTCC CTGGACCTCC GCCGAGCGAA ATTGCGCGCG CGAGCTGGGT
GAGGCGATCG CCGCCGAGAT GGCGCAGCGA ACTCGGGCCG AACTCGCGCG GCTGCGCCAT
TACGACCCGC TGACCGGCCT TGCGAACCGC AGCTACCTTC AGGAGCGCCT GGCGCAGGAC
GGCCAGTCGG CGGCGGCCTT GCTCTTCATC GACCTCGACC GGTTCAAGGC CGTGAACGAC
TCGATGGGGC ACGGCGTGGG CGACGGGCTG CTGATCGAAG TGGCACGCAG CCTCGTGGCA
ACCGTGCGTC CCCATGATCT GGTGGTCCGG CTCGGCGGTG ACGAGTTTGT TGTGCTCTGT
CACCGACTGG ACGCGGCCGG GATCGTCAGC CTCGCCGAGC GGCTGCGGCA AGTGCTCGAG
CAGCCCTTCG AGGTTGCTGG CCGCAAATGC CACATCTCCG CCAGCATCGG AATCGCAATG
GCGGACAGCA TCGGCGATCT GGATCTGGTG CGGGCGGCCG ACATCGCGAT GTATGCCGCC
AAGAAGAACG GTGGCAACCG GGGCGAGCTG TTCCGCCCCT CGCTGTACGA GGAGACGACG
CAGCTCGTCG AACTCGACAA CGACATGCGC GGAGCAATCG AAAGCGAACA GTTTCACCTC
GTGTATCAGC CGATCTTCGC CCTCAACCCG GAGACAGAGA GGCTGGTGGG GTTCGAGGCT
CTGCTGCGCT GGGACCATCC GCTCCACGGT GCCCTGCAGC CCGGCATCTT CATCCCGCTC
GCGGAAAGAC TTGGGCACAT CCATGCAATG GGCAACTGGG TCCTGCGTCG CGCGATCCTG
CAGCTGCAAG CCTTCCGATC CGCCGGCCCG GAGCTGGATC TGAAGATGAA CGTGAACGTG
TCGCCCCTAC AGCTGGCAAG GCCGGACTTT CTGGCGCGTC TCGCCGACTT GCTGGCGCAG
GTGCCCGACC TCCCGCGCCA CGCACTTTGC CTCGAGATCA CCGAGACGTC CCTGAGCGAC
GAGGCCGTCT CCGAGGCCTT GATCTCGATC CGGGCGCTCG GGGTGCGGAT CGCCATCGAC
GATTTCGGCA CAGGCTTCTC GTCGTTGGCC TGCCTGCGCC GACTGCCGGT GGATGTTGCG
AAGCTGGACC GGGCCTTTCT CGGCGGCGGT CATACCGCGG CCCAGGACCA TAGGTTCTTT
GCCGCGGTCA CCGGGCTGGT CCATGCGGCG GATCTGAAGG TGGTGCAGGA GGGCATCGAG
ACACTCGATC AGCTTGCCCT CGTTCGCGCG GCCGGGGCTG ATTTCGCTCA GGGCTTCCAC
CTCGCCGCCC CACTCTCCAT CGCCGCCGCG CTTGGCCTGA TCGCGGCATC ACGAAAGGAA
TGA
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| Protein sequence | MCWPAPPRPS RRSSNGSPLL WQPGGYDRPP PPCRSLPHVC QNFVVRGCLM TISGGTFDPS
ICEMEPIATP GAIQPHGALM TARADSGRVA HASVNLGEIL GLPAASVLGA PIGEVIGRVN
EILLREARRS GSETPETIGS FRRSDGQLLH LHAFQSGDYM CLDIEPVRDE DGRLPPGARQ
SVIETFSSAM TQVELCELAV HGLQLVLGYD RVMAYRFGAD GHGEVIAERR RQDLEPYLGL
HYPASDIPQI ARALYLRQRV GAIADACYRP VPLLGHPELD DGKPLDLTHS SLRSVSPVHL
DYMQNMNTAA SLTIGLADGD RLWGMLVCHN TTPRIAGPEW RAAAGMIGQV VSLLLSRLGE
VENAAETLAR QSTLSTLVER LSTGDTLAAA FVAADQLILD LVGASAAVVR LAGQELHFGR
TPPVDAMQKV LDSLGRPSPL EVLSLDDVTL RHPELPELLA AGSGILLLPL TSGDGDLIAW
FRPEHVQTIT WGGNPAEHGT WNPATQRMRP RASFDAWKET VTGRSLPWTS AERNCARELG
EAIAAEMAQR TRAELARLRH YDPLTGLANR SYLQERLAQD GQSAAALLFI DLDRFKAVND
SMGHGVGDGL LIEVARSLVA TVRPHDLVVR LGGDEFVVLC HRLDAAGIVS LAERLRQVLE
QPFEVAGRKC HISASIGIAM ADSIGDLDLV RAADIAMYAA KKNGGNRGEL FRPSLYEETT
QLVELDNDMR GAIESEQFHL VYQPIFALNP ETERLVGFEA LLRWDHPLHG ALQPGIFIPL
AERLGHIHAM GNWVLRRAIL QLQAFRSAGP ELDLKMNVNV SPLQLARPDF LARLADLLAQ
VPDLPRHALC LEITETSLSD EAVSEALISI RALGVRIAID DFGTGFSSLA CLRRLPVDVA
KLDRAFLGGG HTAAQDHRFF AAVTGLVHAA DLKVVQEGIE TLDQLALVRA AGADFAQGFH
LAAPLSIAAA LGLIAASRKE
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