| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSP_4111 |
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| Symbol | bhpP |
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| ID | 3711866 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodobacter sphaeroides 2.4.1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007489 |
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| Strand | + |
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| Start bp | 76434 |
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| End bp | 79229 |
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| Gene Length | 2796 bp |
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| Protein Length | 931 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640069460 |
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| Product | diguanylate cyclase/phosphodiesterase with phytochrome (GAF) sensor |
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| Protein accession | YP_345327 |
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| Protein GI | 77404754 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain
[COG2200] FOG: EAL domain
[COG4251] Bacteriophytochrome (light-regulated signal transduction histidine kinase) |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACGATCT CTGGGGGCAC CTTCGACCCT TCGATCTGCG AGATGGAACC GATCGCCACG
CCCGGCGCGA TCCAGCCGCA CGGAGCGCTG ATGACCGCGC GGGCCGACAG CGGCCGCGTC
GCCCATGCCA GCGTCAACTT GGGCGAGATC CTCGGCCTGC CCGCGGCCTC GGTTCTGGGG
GCGCCCATCG GAGAGGTGAT CGGGCGCGTC AACGAGATCT TGCTGCGCGA GGCGCGTCGT
AGCGGCTCCG AGACGCCGGA AACAATCGGG TCCTTCCGCA GAAGCGACGG ACAGCTGCTG
CATCTCCATG CGTTCCAGTC GGGCGACTAC ATGTGCCTCG ACATCGAGCC GGTGCGCGAT
GAGGATGGCC GGCTCCCTCC GGGAGCCAGG CAATCGGTTA TCGAGACCTT CTCCAGCGCC
ATGACGCAGG TGGAACTCTG CGAGCTCGCG GTTCACGGGC TGCAGCTGGT GCTGGGCTAT
GACCGGGTGA TGGCCTATCG CTTCGGCGCT GACGGACATG GCGAGGTTAT CGCCGAGCGG
CGCCGGCAGG ATCTCGAGCC TTACCTGGGC TTGCACTACC CGGCATCGGA CATTCCGCAA
ATCGCGCGCG CGCTCTACCT GCGCCAGAGG GTGGGTGCCA TTGCGGATGC GTGCTACCGG
CCGGTTCCGT TGCTCGGCCA TCCCGAGCTC GACGACGGCA AGCCCCTCGA CCTGACGCAC
AGTTCGCTGC GCAGCGTCTC GCCGATCCAT CTCGACTACA TGCAGAACAT GCACACGGCG
GCCAGCCTGA CCATCGGGCT GGCTGACGGC GACAGGCTGT GGGGGATGCT GGTCTGCCAC
AACACGACCC CTCGTATTGC CGGCCCCGAG TGGCGGGCGA CGGCGGGCAT GATCGGGCAA
GTGGTCTCGC TGCTCCTGAG CCGGCTGGGC GAGGTCGAGA ATGCCGCAGA GACACTGGCC
CGGCAGTCGA CGCTCTCGAC GCTGGTCGAA CGGCTATCGG CCGGCGATAC GCTGGCTGCG
GCATTTGTCG CGGCAGATCA GCTGATCCTC GATCTGGTCG GAGCCAGTGC CGCGGTCGTG
CGGCTGGCTG GACAGGAATT GCACTTCGGG CGGACGCCGC CGGTCGATGC GATGCAGAAG
GCCTTGGACA TTCTGGGGCG CCCCTCGCCG CTGGAGGTGC TGTCCCTCGA CGACGTCACC
CTGCGCCATC CCGAGCTGCC GGAGCTGCTG GCGGCCGGAA GCGGCATCCT GCTGCTCCCC
CTGACATCCG GGGACGGAGA TCTGATCGCC TGGTTCCGCC CCGAGCATGT GCAGACGATC
ACCTGGGGTG GCAATCCGGC CGAACATGGC ACCTGGAACC CGGCAACGCA GCGGATGAGA
CCGCGCGCCT CGTTCGACGC CTGGAAGGAG ACGGTCACCG GCCGCTCGCT TCCCTGGACC
TCCGCCGAAC GGAGTTGCGC GCGCGAGTTG GGTGAGGCGA TCGCCGCCGA GATGGCGCAG
CGAACTCGGG CCGAACTCGC GCGACTGCGC CATTACGACC CGCTGACCGG CCTTGCGAAC
CGCAGCTACC TTCAGGAGCG CCTGGCGCAG GACGGCCAGC CGGCGGCGGC CTTGCTCTTC
ATCGACCTTG ACCGGTTCAA GGCCGTAAAC GACTCGATGG GGCACAGCGT GGGCGACGGG
CTGCTGATCG AAGTGGCACG CAGCCTCGTG GCAACCGTGC GTCCCCATGA TCTGGTGGTT
CGGCTCGGCG GTGACGAGTT TGTTGTGCTC TGTCACCGAC TGGACGCGGC CGGAATCGTC
AGCCTCGCCG AGCGGCTGCG GCAAGCGCTC GAGCAGCCCT TCGAGGTTGC TGGCCGCAAA
TGCCACATCT CCGCCAGCAT CGGAATCGCA ATGGCGGACA GCATCGGCGA TCTGGATCTG
GTGCGGGCGG CCGACATCGC GATGTATGCC GCCAAGAAGA ACGGTGGCAA TCGGGGCGAG
CTGTTCCGCC CCTCGCTGTA CGAGGAGACG ACGCAGCTCG TCGAACTCGA CAACGACATG
CGCGGAGCAA TCGAAAGCGA ACAGTTTCAC CTCGTGTATC AGCCGATCTT CGCCCTCAGC
CCCGAGGCAG AGAGGCTGGT GGGGTTCGAG GCTCTGCTGC GCTGGGACCA TCCGCACCAC
GGCGCCCTGC AGCCCGGCAT CTTCATCCCG CTTGCGGAAA GACTGGGGCA CATCCATGCA
ATGGGCGACT GGGTCCTGCG CCGCGCGATC CTGCAGCTGC AGGCCTTCCG ATCCGCCGGC
CCGGAGCTGG ATCTGAAGAT GAACGTGAAC GTTTCGCCCC GTCAGCTGGC AAAGCCGGAC
TTCCCGGCGC GTCTCGCCGA CTTGCTGGCG CAGGTGCCCG ACCTCCCGCG CCACGCACTT
TGCCTCGAGA TCACCGAGAC GTCCCTGAGC GACGAGGCCG TCTCCGAGGC CTTGATCTCG
ATCCGGGCGC TCGGGGTGCG GATCGCCATC GACGATTTCG GCACAGGCTT CTCGTCGTTG
GCCTGCCTGC GCCGACTGCC GGTGGATGTT GCGAAGCTGG ACCGGGCCTT TCTCGGCGGC
GGTCATACCG CGGCCCAGGA CCATAGGTTC TTTGCCGCGG TCACCGGGCT GGTCCATGCG
GCGGATCTGA AGGTGGTGCA GGAGGGCATC GAGACACTCG ATCAGCTTGC CCTCGTTCGC
GCGGCCGGGG CTGATTTCGC TCAGGGCTTC CACCTCGCCG CCCCACTCTC CATCGCCGCC
GCCCTCGACC TGATCGCGGC ATCACGAGAG GAATGA
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| Protein sequence | MTISGGTFDP SICEMEPIAT PGAIQPHGAL MTARADSGRV AHASVNLGEI LGLPAASVLG
APIGEVIGRV NEILLREARR SGSETPETIG SFRRSDGQLL HLHAFQSGDY MCLDIEPVRD
EDGRLPPGAR QSVIETFSSA MTQVELCELA VHGLQLVLGY DRVMAYRFGA DGHGEVIAER
RRQDLEPYLG LHYPASDIPQ IARALYLRQR VGAIADACYR PVPLLGHPEL DDGKPLDLTH
SSLRSVSPIH LDYMQNMHTA ASLTIGLADG DRLWGMLVCH NTTPRIAGPE WRATAGMIGQ
VVSLLLSRLG EVENAAETLA RQSTLSTLVE RLSAGDTLAA AFVAADQLIL DLVGASAAVV
RLAGQELHFG RTPPVDAMQK ALDILGRPSP LEVLSLDDVT LRHPELPELL AAGSGILLLP
LTSGDGDLIA WFRPEHVQTI TWGGNPAEHG TWNPATQRMR PRASFDAWKE TVTGRSLPWT
SAERSCAREL GEAIAAEMAQ RTRAELARLR HYDPLTGLAN RSYLQERLAQ DGQPAAALLF
IDLDRFKAVN DSMGHSVGDG LLIEVARSLV ATVRPHDLVV RLGGDEFVVL CHRLDAAGIV
SLAERLRQAL EQPFEVAGRK CHISASIGIA MADSIGDLDL VRAADIAMYA AKKNGGNRGE
LFRPSLYEET TQLVELDNDM RGAIESEQFH LVYQPIFALS PEAERLVGFE ALLRWDHPHH
GALQPGIFIP LAERLGHIHA MGDWVLRRAI LQLQAFRSAG PELDLKMNVN VSPRQLAKPD
FPARLADLLA QVPDLPRHAL CLEITETSLS DEAVSEALIS IRALGVRIAI DDFGTGFSSL
ACLRRLPVDV AKLDRAFLGG GHTAAQDHRF FAAVTGLVHA ADLKVVQEGI ETLDQLALVR
AAGADFAQGF HLAAPLSIAA ALDLIAASRE E
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