| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSP_4109 |
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| Symbol | gmd |
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| ID | 3711858 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodobacter sphaeroides 2.4.1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007489 |
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| Strand | - |
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| Start bp | 64908 |
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| End bp | 66029 |
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| Gene Length | 1122 bp |
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| Protein Length | 373 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640069452 |
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| Product | NAD-dependent epimerase/dehydratase |
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| Protein accession | YP_345319 |
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| Protein GI | 77404746 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1089] GDP-D-mannose dehydratase |
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| TIGRFAM ID | [TIGR01472] GDP-mannose 4,6-dehydratase |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACGAAGA CCGCCCTGAT TACCGGGATC ACGGGGCAGG ACGGCTCGTA CTTGGCGGAG
TTCCTTCTGG AGAAGGGCTA TGAGGTCCAC GGCATCAAGC GCCGGGCTTC AATGTTCAAC
ACCCAGCGAA TTGACCACAT CTACGAAGAT CCGCACGCCC GCAATCCAAG GCTGAAGCTG
CATTACGGCG ATCTGACCGA CAGTTCGAAC CTCACCCGTA TCCTTGCCCA GATCCAACCG
GACGAGGTTT ACAACCTCGG CGCCCAGAGC CATGTTGCGG TGAGCTTCGA GAGCCCCGAG
TATACCGCCG ATGTCGATGC GGTGGGAGCG CTGCGGCTGC TCGAGGCGAT TCGCTTCCTC
GGGCTGGAAA AAAAGACGCG GTTTTACCAA GCATCGACCT CTGAGCTTTA CGGCCTCGTG
CAAGAGATAC CGCAGCGTGA GACGACGCCA TTCTATCCGC GCTCGCCCTA TGCCGTGGCC
AAGCTCTATG CCTATTGGAT CACCGTCAAT TACCGCGAGT CTTACGGGAT CTACGCCTGC
AACGGCATCC TCTTTAACCA TGAGTCCCCG CGCCGGGGCG AGACCTTCGT AACCCGCAAG
ATCACCCGGG GCCTTTCCCA TATCGCCCAG GGACTGGAGC CCTGCCTATA CATGGGCAAC
ATCGACTCCC TCCGCGACTG GGGTCACGCC AGGGACTATG TTCGGATGCA GTGGATGATG
CTGCAGCAGG AGAAACCCGA TGATTTCGTG ATTGCGACTG GCTTGCAATA CTCGGTGCGC
GAGTTCATCA AGTGGTCGGC CGCCGAGCTC GGCATCACGC TCCGCTTTGA AGGGCAGGGC
GTGGAGGAAA TCGGGGTCGT GGAAGACGTC TGTGGCGATA TGGCGCCTGA GGTTACGCGC
GGCGACGTGA TCGTGCGCAT CGACCCGCGC TATTTCCGCC CGGCGGAAGT GGAGACGCTT
CTAGGCGATC CGGCGAAGGC CAAGCAGAAG CTCGGTTGGG TACCGGAAAT GACCGTGCGC
GAGATGTGCG CCGAGATGGT GGCCGAGGAT CTGAAATCCG CCCGCCGCCA TCGACTTCTT
CGTGAGAACG GGCTGCACCT GCCCGTGGCG CTCGAAAGCT GA
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| Protein sequence | MTKTALITGI TGQDGSYLAE FLLEKGYEVH GIKRRASMFN TQRIDHIYED PHARNPRLKL
HYGDLTDSSN LTRILAQIQP DEVYNLGAQS HVAVSFESPE YTADVDAVGA LRLLEAIRFL
GLEKKTRFYQ ASTSELYGLV QEIPQRETTP FYPRSPYAVA KLYAYWITVN YRESYGIYAC
NGILFNHESP RRGETFVTRK ITRGLSHIAQ GLEPCLYMGN IDSLRDWGHA RDYVRMQWMM
LQQEKPDDFV IATGLQYSVR EFIKWSAAEL GITLRFEGQG VEEIGVVEDV CGDMAPEVTR
GDVIVRIDPR YFRPAEVETL LGDPAKAKQK LGWVPEMTVR EMCAEMVAED LKSARRHRLL
RENGLHLPVA LES
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