| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSP_4080 |
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| Symbol | |
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| ID | 3711954 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodobacter sphaeroides 2.4.1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007489 |
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| Strand | - |
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| Start bp | 35883 |
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| End bp | 37580 |
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| Gene Length | 1698 bp |
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| Protein Length | 565 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640069431 |
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| Product | TPR repeat-containing SPINDLY family protein |
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| Protein accession | YP_345298 |
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| Protein GI | 77404725 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG3914] Predicted O-linked N-acetylglucosamine transferase, SPINDLY family |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTCGGCC TGGCGTTAAG AGACCTTGGC TTCCTCGATG AAGCCCTGGC AAGCTACAGG
CAGGCAGTCC ACCTGAACCC GGCCTTCGCC GAAGCCCACA ACAATCTCGG CATCCTGCTC
AGGGCAGACG GACAGATCGA GGCGGCTGCC GACAGCTACA GGCGGGCCTT GGATCTGAAG
CCCGAGTTTG CAGAAGCTGC CGCAAACCTC GGAAATACGC TGAAGGAAAT GGGGCAGATG
GATGCTGCCC TGTCCTGCTA CCGGCAGGAA TTGCAGGCTG CGGCGCTCAA TCTCCACGGC
ATCGGCGCCT GGGTCGAGGA ATGCGTGAAC CTGCTGTCCA TCGAGTGCCA GCCGGCCATC
TTCCGCTCGG AAGAGGAACT CTCGCGCATG CGCAACCGGA TCGAGCAGGT TCTGGCGGGG
TTGGCGCAAC GTTTGGAAGA TACGGACCCG CAGAAAATGG GTGAGCGGGC AGTGATGCGG
CGCGCGGCGA CCAAGATCAC CGGCTTCTAC ATCGCCTACC ACCAGCAGAA CGACCGGCCT
TTGATGGAGC GCCTGTCGAC TGTCCTGACG CAGCTCCTCG GCATCTTGAA CACGCCCCCG
GCGCACAGAC CCGGAGGCCG GCACCGGATC CGGCTTGGTA TCGCTTCGCA CTTCCTGAGA
AACCACAACG CTGCGAACTG GGCCTATGGC TGGTTGAGCC ACTTGCCCAA GGCCGATTAC
GAGTTCTTCA CCTATTGCTT CCAGTCGGAA AGTGATGATC TTTCGCGCCG GTTTGCGGCT
CTGGGGACGC ATCGCACTCT GCGCTTCGAC CCGATGGCAT TCGAGACGGT CGTGAACGTC
ATGCGGGCGG ACGATCTGGA CTTCCTCATG CTGCCGGACG TCGGAATGAC CAGTGTCAGC
CGCATCCTGT CACTGCATCG CATTGCCCGG ACGCAATTCA CTGCATGGGG ACATCCGGTG
ACTACCGGTT CGACCCAAAT GGATTTCTTC CTCTCCAGCG ACCTGATGGA GCCAGAGGGC
GCGCAGGCGC ACTACAGCGA GAGGCTCTTG CGACTGCCGA ACTTGGCGCT GTATCTGGAT
CCATGCCAGC AGGGACTGGC TGAACCCGCG CCGCGACTTC GGGAAGACCG GATCCTCTAC
GGCTGCCTGC AGTCGCTCTT CAAGTATCTT CCGCGCTACG ACGACTTGTT CCCGCGTATC
GCATTGGAAG TTCCGAAGGC GCTGTTTGTG TTTCTCGAGG GCAAGCCATC CTATATGACG
GCCGTCCTGC GCGAGCGTCT ACAGGGCGCA TTCCGGCGCT TCGGGCTCGA CGCCGACAGA
TTTGTCCTGT TTCTGCCACG GCGCAGCTCT GAAGACTTCA ACCGGCTGAT GCGGTCGATG
GATGTCGTCG TAGACAGCCT GGGCTGGAGC GGCGGCAACA CCAGTCTCGC GGCCGTCCGG
GACGCCCTCC CCCTCGCTAC AATGCCGGGC GACTTCATGA GGGGCAGGCA CACATCGGCC
ATCCTCCAAA GGATGCAAGC AGACGAATTT GTGGCTGCAT CTATCGATGA GTACATCAAT
AAGTTGATCG CTTTGGGGAA TGACACGGAC TATCGCCGCT ACTGCTCCAC CACGCTGCGC
GACCGCGGGC AAGCGCTCTA TGAAGACAAC ATCTTCATCA CGGCTCTGGA CGATTTCTTG
AGGCATGACC CCTGTTGA
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| Protein sequence | MLGLALRDLG FLDEALASYR QAVHLNPAFA EAHNNLGILL RADGQIEAAA DSYRRALDLK
PEFAEAAANL GNTLKEMGQM DAALSCYRQE LQAAALNLHG IGAWVEECVN LLSIECQPAI
FRSEEELSRM RNRIEQVLAG LAQRLEDTDP QKMGERAVMR RAATKITGFY IAYHQQNDRP
LMERLSTVLT QLLGILNTPP AHRPGGRHRI RLGIASHFLR NHNAANWAYG WLSHLPKADY
EFFTYCFQSE SDDLSRRFAA LGTHRTLRFD PMAFETVVNV MRADDLDFLM LPDVGMTSVS
RILSLHRIAR TQFTAWGHPV TTGSTQMDFF LSSDLMEPEG AQAHYSERLL RLPNLALYLD
PCQQGLAEPA PRLREDRILY GCLQSLFKYL PRYDDLFPRI ALEVPKALFV FLEGKPSYMT
AVLRERLQGA FRRFGLDADR FVLFLPRRSS EDFNRLMRSM DVVVDSLGWS GGNTSLAAVR
DALPLATMPG DFMRGRHTSA ILQRMQADEF VAASIDEYIN KLIALGNDTD YRRYCSTTLR
DRGQALYEDN IFITALDDFL RHDPC
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