| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSP_7371 |
|---|
| Symbol | |
|---|
| ID | 3712025 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodobacter sphaeroides 2.4.1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007488 |
|---|
| Strand | + |
|---|
| Start bp | 94858 |
|---|
| End bp | 95622 |
|---|
| Gene Length | 765 bp |
|---|
| Protein Length | 254 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 640069380 |
|---|
| Product | short-chain alcohol dehydrogenase |
|---|
| Protein accession | YP_345247 |
|---|
| Protein GI | 77404673 |
|---|
| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
|---|
| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGGCC CCTTCGACCT GACGGGTCGG GTCGCCGTCG TCACCGGGGC CGGTCGCGGC
CTCGGCGCGG CGATGGCCGA GGCGCTGGCC GCCGCGGGCG CCACGGTCGT GCTCTCGGGG
CGCGATCCGG GCCCGCTCGA ACGCACCGCC GCGGCCATCC GCGCGGCGGG CGGCGCGGCC
TCGGTCACGC TCTGCGACAT AACGAAGCGC GCCGAGGTCG AGGCTCTGGT GGCGGAGACC
GAAGCGCGTC ACGGCCGCCT CGACGTGCTC GTGAACAATG CGGGCATCAC CGGGCGCTCG
GCGCTGACCG AGGTCGAGGA TGCCGACTGG GATCTGATGC TCCGCACCCA CATGACCGGC
CCCTTCATGG CCTGCCGCGC GGCGCTGCCC GGCATGATGC GGCGCGGCGC GGGCAAGATC
GTCAACACCG TCTCGGTGCT GGGAGAGCTC GGCCGGCCCT GGGTGGTGCC CTATGCGGCG
GCCAAGGGCG GGCTGCGGAT GCTGACGCGG GCCCTTGCCA CCGAGGTGGC GGGCGCCAAC
ATTCAGGTCA ACGGCATCGG CCCGGGCTAT TTCGAGACCG AGATGAATGC GGCCATCGTC
CAGAACGAGG CGCTCCATGC CGAGCGCGTG GCCCGCGTGC CCGCCCGGCG CTGGGGCCGC
CCTGTCGAAC TCGGCGGAAC CGCGGTCTAT CTCGCCTCGG CGGCGTCCGA TTACGTCAAC
GGGCAGATCA TCTATGTCGA CGGCGGCCTG ACCGCCTCAT TCTAG
|
|---|
| Protein sequence | MSGPFDLTGR VAVVTGAGRG LGAAMAEALA AAGATVVLSG RDPGPLERTA AAIRAAGGAA
SVTLCDITKR AEVEALVAET EARHGRLDVL VNNAGITGRS ALTEVEDADW DLMLRTHMTG
PFMACRAALP GMMRRGAGKI VNTVSVLGEL GRPWVVPYAA AKGGLRMLTR ALATEVAGAN
IQVNGIGPGY FETEMNAAIV QNEALHAERV ARVPARRWGR PVELGGTAVY LASAASDYVN
GQIIYVDGGL TASF
|
|---|
| |