Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSP_4016 |
Symbol | dctP |
ID | 3712045 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodobacter sphaeroides 2.4.1 |
Kingdom | Bacteria |
Replicon accession | NC_007488 |
Strand | + |
Start bp | 30256 |
End bp | 31311 |
Gene Length | 1056 bp |
Protein Length | 351 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 640069322 |
Product | TRAP dicarboxylate family transporter DctP subunit |
Protein accession | YP_345189 |
Protein GI | 77404615 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1638] TRAP-type C4-dicarboxylate transport system, periplasmic component |
TIGRFAM ID | [TIGR00787] tripartite ATP-independent periplasmic transporter solute receptor, DctP family |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.807538 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCGTCAT GGATTCGCCA CAAGAGCGAG CCGCCAACAG AGAGAGAGAC CGAGATGACC CAAGCGCAGA CATTCCTCGC CGGAACCGCC CTGGCCCTGC TGGCCGCCCT GCCGGCCTGG GCCGAAGAGT TCCGCATCGC CGTGGGCGAT GGCGCGGGCG GCACGCAGGA GGCGCTCGGC AAGGCCTTCG TCGCGGCGCT CGAGAAGGAG TCGGGCGGCG AGATGACGGG CAAGCTGTTC CTGAACGGCC AGCTCGGCGA CGAGCAGGAC ACGGTGACGG CCGCGGCTAC CGGCACGCTC GACTTCTCGA TCCTCGCGAT CAACAACATC ACGCCCTTCT CGCCCTCGGT GGGCACGCTG ACGCTGCCCT ATGTCATCCT GAGCCAGGAG GATGCCGAGA CGGTCACGCA GGGCGAGGTC GGCCGGCAGA TGATCGAGAA GACGGTCGAG GATGCGGGCG TGCGCATCAT CGGCTGGGGC TATTCGGGCT TCCGGGTGCT GACCAATTCG AAGAAGCCCG TGGCCTCGGT CGAGGACATG CAGGGGCTGA TCGTGCGCGT GCCCAAGAAC GAGATCATGA TCGAGACCTA CAAGAGCTGG GGCATCAACC CCACGCCGAT GGCTTGGGGC GAGACCTTCG CGGCGCTTCA GCAGAAGGTC GTGGACGGGC AGGACAATCC CTACATGACC GTCTATGCGA TGAAGTTCGA CGAGGTGCAG AAATATGTCA CCGAGCTGCG CTACATCTTC TCGATCGAGC CGCTGATCGT GAGCGAGGCC CTGTTCGAGG GGCTGAGCGA GGAGAAGCAG GCGCAGATCC TCGCCGCGGG CGAGGCGGCG ACGCAGGCCT CCTCGGCCTT CCTGCGCGAG CAGGAGAGCC GGATCCGCGA CGAGCTGGTG GCGCGCGGCA TGGAGATCAC GCCGCCCGCG GACGGCGAGA AGGGCTTCAT CGAGCTGGCG ACCGCGCAGG TCTGGCCCAA GTTCGCCGAC CAGATCGGCG GCATCGAGGT GCTGAACGGC GTCTTGACCT CGCTCGGCCG GCCCACCGTC CAGTAA
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Protein sequence | MSSWIRHKSE PPTERETEMT QAQTFLAGTA LALLAALPAW AEEFRIAVGD GAGGTQEALG KAFVAALEKE SGGEMTGKLF LNGQLGDEQD TVTAAATGTL DFSILAINNI TPFSPSVGTL TLPYVILSQE DAETVTQGEV GRQMIEKTVE DAGVRIIGWG YSGFRVLTNS KKPVASVEDM QGLIVRVPKN EIMIETYKSW GINPTPMAWG ETFAALQQKV VDGQDNPYMT VYAMKFDEVQ KYVTELRYIF SIEPLIVSEA LFEGLSEEKQ AQILAAGEAA TQASSAFLRE QESRIRDELV ARGMEITPPA DGEKGFIELA TAQVWPKFAD QIGGIEVLNG VLTSLGRPTV Q
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