| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSP_4014 |
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| Symbol | |
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| ID | 3712047 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodobacter sphaeroides 2.4.1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007488 |
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| Strand | + |
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| Start bp | 31924 |
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| End bp | 33264 |
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| Gene Length | 1341 bp |
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| Protein Length | 446 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 640069324 |
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| Product | TRAP-T family transporter large inner membrane subunit DctM |
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| Protein accession | YP_345191 |
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| Protein GI | 77404617 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1593] TRAP-type C4-dicarboxylate transport system, large permease component |
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| TIGRFAM ID | [TIGR00786] TRAP transporter, DctM subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGACGGCC TTTTGATCGA AATCCTGTTC GGGGCCTTCT TCGCCCTCAT GCTTCTCGGC
GCGCCGATCA CCGTGGCGCT CGGCGTCTCG GCGCTGGCCG CCATGGTCTA TCTGGGCGAC
AACCCGATCA AGATGGTGCA GATGGCCTGG TCCTCGGTGG GGTCCTTCCC GCTGATGGCG
CTGCCCTCCT TCATCCTCGC CGGCGCGCTG ATGGAGGCCG CGGGCCTGTC GCGGCGGCTC
ATTGCGGTGG CCGAAAGCCT CGCCGGTCCC TTCACGGGGG GCCTGTCGGC CGCGACGATC
ATGGCCTGCC TCTTCTTCGG CGCGATCTCG GGCTCGGGTC CGGCCACCAC GGCGGCGGTG
GGGATGCTGA TGATCCCGGC CATGTCGCGG CAGGGCTACG GGCCGGGCTA TGCGGCCTCG
GTCACGGCGG CGGCGGGCGG GCTCGGGATC ATCATCCCGC CCTCGATCCC GATGGTGATC
TTCGGCATCT CGGCCATGGG GCTCGCCCCG CCGCCCGAGG CCATCGCGGC GCACGGTCCC
TTCCAGTCGG TCTCGATCTC GAAGCTCTTC ATCGCGGGCT TCGTGCCGGG GGTCATCATG
GCGGGCGGGC TCCTTGTGAT GAACTACATC CGCTGCCGGA TGCGGGGTTT CCGCGGCTCG
GCCGCGCCGC TCTCGGCCCG CAACGTGGCC CGCGCCTGCT ATCAGGGCTT CTGGGCGCTG
CTCGCCCCGG TCGTGATCCT CGGCGGCATC TATTCGGGCT TCTTCACCCC CACCGAGGCC
GCCATCGTCG CGATCTTCTA CACGCTCTTC GTCGGGATCT TCATCTACCG CGAGCTGGAT
CTGGCCGAGG TCATCAAGGC GCTCGACACG ACCACCTGGC TGGCGGGGCG GGTGCTGCTC
GTGCTCTTCG CGGCCACGAT CTTCGGCCGG GTGCTGGTCG AGAACAACAT TCCGGGCATC
ATCGCGGGCG GCGTTCTGGG GCTTACCACC AACATCCATG CGATCTGGGC CATGGTGATC
GGGATGCTGC TCATCGTCGG CATGTTCATG GAGACGCTGG CCGCCATCAT GATCCTCGTG
CCGGTGATGC TGCCCGTGGC CTACATGGTG GGCATCGACC CGATCCACTT CGGGATCGTG
ATGATCTGCA CGCTCTCTGT CGGCTTCCAG ACCCCGCCGC TCGGCGAGAA CCTCTTCATC
GCCTCGGGCA TCTCGGGCGT CTCGATCGAG CGGATCAGCC TGCGCGCGCT GCCCTTCGCG
GCCGCGTCGG TCACCGCAAT CTTCATCATC GCCAGCTTCC CCGAGCTTGC CCTCTGGCTG
CCCCGGGCGA TGGGCTACTA G
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| Protein sequence | MDGLLIEILF GAFFALMLLG APITVALGVS ALAAMVYLGD NPIKMVQMAW SSVGSFPLMA
LPSFILAGAL MEAAGLSRRL IAVAESLAGP FTGGLSAATI MACLFFGAIS GSGPATTAAV
GMLMIPAMSR QGYGPGYAAS VTAAAGGLGI IIPPSIPMVI FGISAMGLAP PPEAIAAHGP
FQSVSISKLF IAGFVPGVIM AGGLLVMNYI RCRMRGFRGS AAPLSARNVA RACYQGFWAL
LAPVVILGGI YSGFFTPTEA AIVAIFYTLF VGIFIYRELD LAEVIKALDT TTWLAGRVLL
VLFAATIFGR VLVENNIPGI IAGGVLGLTT NIHAIWAMVI GMLLIVGMFM ETLAAIMILV
PVMLPVAYMV GIDPIHFGIV MICTLSVGFQ TPPLGENLFI ASGISGVSIE RISLRALPFA
AASVTAIFII ASFPELALWL PRAMGY
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