Gene RSP_4007 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRSP_4007 
Symbol 
ID3711780 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides 2.4.1 
KingdomBacteria 
Replicon accessionNC_007488 
Strand
Start bp40884 
End bp41990 
Gene Length1107 bp 
Protein Length368 aa 
Translation table11 
GC content71% 
IMG OID640069331 
Productmandelate racemase/muconate lactonizing protein 
Protein accessionYP_345198 
Protein GI77404624 
COG category[M] Cell wall/membrane/envelope biogenesis
[R] General function prediction only 
COG ID[COG4948] L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGATCA CCGAACTGCA TCTCTACGCC CACCCGCTGC CGGTGCGCGA CGGCCCCTAC 
CGCATGGCCA GCACCGAGGT CTGGTCGCTC GACACGACGC TGGTGAAGCT CGTGACGGAC
AGCGGCCTGA TCGGTTGGGG CGAGACCTGC CCCGTGGGGC CGGTCTACCA GCCGCAGCAT
GCGGCGGGCG CCCGGGCCGC GCTGGCCGAG ATGGCGCCGG GCCTGATCGG GGCCGATCCG
CTGCAGCCCC TGCGGCTGCA ACGGCGGATG GACGGGCTCC TGAACGGGCA CCGCTATGCC
AAAGCCGCCA TCGACATCGC GGCGCACGAC CTGATGGGCA AGGCCTGGGG CGTGCGGGTG
GCCGATCTTC TGGGCGGCGC GGTGACCGAG CGGGTGCCCT CCTACTATGC CTCGGGCGTG
GGCGAGCCCG ACGAGATCGC CCGCATCGCG GCCGAGCGCG CGGACGAGGG CTATCCGCGG
ATGCAGGTCA AGATCGGCGG CCGCCCGGTC GAGATCGATA TCGAGACGAT CCGCAAGGTC
TGGGAACGGG TGGGCACCCG GATGCGGCTG GCAGTGGACG GCAACCGCGG CCTCACCACG
CGCGATGCGC TGCGCCTGAG CCGCGAGTGC CCGGAGATCC CCTTCATCCT CGAGCAGCCC
TGCAACAGCA TCGAGGAGAT CGCCGCGATC CGCGGCCAGC TGCATCACGC GGTCTATCTC
GACGAGACGG CCGAGGATGT GGCGACCGTG CTGCGCGCGG TGGGGCAGGG GGTCTGCGAC
GGCTTCGGCA TGAAGGTCAC GCGGATCGGC GGCCTCCGCC CGATGGCGGT CTTCCGCGAC
ATCTGCGAGG TCCGCTCGAT GCCCCACACC TGCGACGACG CCTGGGGCGG CGACATCATC
GCGGCCGCCT GCACCCATAT CGGCGCCACC GTCCAGCCGC GGCTGATGGA GGGGGTCTGG
CTGGCCCAGC CCTATATCGA GGGCCATTTC GACCCCGAGA ACGGCCTGCG GATCGAGGGC
GGCCACATCC GCCTGCCCGA GGGGCCGGGC CTCGGGATCG TGCCGGACGA GAGCCTCTTC
GGCGCGCCGG TCGCGTCTTT CGGGTAG
 
Protein sequence
MKITELHLYA HPLPVRDGPY RMASTEVWSL DTTLVKLVTD SGLIGWGETC PVGPVYQPQH 
AAGARAALAE MAPGLIGADP LQPLRLQRRM DGLLNGHRYA KAAIDIAAHD LMGKAWGVRV
ADLLGGAVTE RVPSYYASGV GEPDEIARIA AERADEGYPR MQVKIGGRPV EIDIETIRKV
WERVGTRMRL AVDGNRGLTT RDALRLSREC PEIPFILEQP CNSIEEIAAI RGQLHHAVYL
DETAEDVATV LRAVGQGVCD GFGMKVTRIG GLRPMAVFRD ICEVRSMPHT CDDAWGGDII
AAACTHIGAT VQPRLMEGVW LAQPYIEGHF DPENGLRIEG GHIRLPEGPG LGIVPDESLF
GAPVASFG