Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSP_4007 |
Symbol | |
ID | 3711780 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodobacter sphaeroides 2.4.1 |
Kingdom | Bacteria |
Replicon accession | NC_007488 |
Strand | + |
Start bp | 40884 |
End bp | 41990 |
Gene Length | 1107 bp |
Protein Length | 368 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 640069331 |
Product | mandelate racemase/muconate lactonizing protein |
Protein accession | YP_345198 |
Protein GI | 77404624 |
COG category | [M] Cell wall/membrane/envelope biogenesis [R] General function prediction only |
COG ID | [COG4948] L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAGATCA CCGAACTGCA TCTCTACGCC CACCCGCTGC CGGTGCGCGA CGGCCCCTAC CGCATGGCCA GCACCGAGGT CTGGTCGCTC GACACGACGC TGGTGAAGCT CGTGACGGAC AGCGGCCTGA TCGGTTGGGG CGAGACCTGC CCCGTGGGGC CGGTCTACCA GCCGCAGCAT GCGGCGGGCG CCCGGGCCGC GCTGGCCGAG ATGGCGCCGG GCCTGATCGG GGCCGATCCG CTGCAGCCCC TGCGGCTGCA ACGGCGGATG GACGGGCTCC TGAACGGGCA CCGCTATGCC AAAGCCGCCA TCGACATCGC GGCGCACGAC CTGATGGGCA AGGCCTGGGG CGTGCGGGTG GCCGATCTTC TGGGCGGCGC GGTGACCGAG CGGGTGCCCT CCTACTATGC CTCGGGCGTG GGCGAGCCCG ACGAGATCGC CCGCATCGCG GCCGAGCGCG CGGACGAGGG CTATCCGCGG ATGCAGGTCA AGATCGGCGG CCGCCCGGTC GAGATCGATA TCGAGACGAT CCGCAAGGTC TGGGAACGGG TGGGCACCCG GATGCGGCTG GCAGTGGACG GCAACCGCGG CCTCACCACG CGCGATGCGC TGCGCCTGAG CCGCGAGTGC CCGGAGATCC CCTTCATCCT CGAGCAGCCC TGCAACAGCA TCGAGGAGAT CGCCGCGATC CGCGGCCAGC TGCATCACGC GGTCTATCTC GACGAGACGG CCGAGGATGT GGCGACCGTG CTGCGCGCGG TGGGGCAGGG GGTCTGCGAC GGCTTCGGCA TGAAGGTCAC GCGGATCGGC GGCCTCCGCC CGATGGCGGT CTTCCGCGAC ATCTGCGAGG TCCGCTCGAT GCCCCACACC TGCGACGACG CCTGGGGCGG CGACATCATC GCGGCCGCCT GCACCCATAT CGGCGCCACC GTCCAGCCGC GGCTGATGGA GGGGGTCTGG CTGGCCCAGC CCTATATCGA GGGCCATTTC GACCCCGAGA ACGGCCTGCG GATCGAGGGC GGCCACATCC GCCTGCCCGA GGGGCCGGGC CTCGGGATCG TGCCGGACGA GAGCCTCTTC GGCGCGCCGG TCGCGTCTTT CGGGTAG
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Protein sequence | MKITELHLYA HPLPVRDGPY RMASTEVWSL DTTLVKLVTD SGLIGWGETC PVGPVYQPQH AAGARAALAE MAPGLIGADP LQPLRLQRRM DGLLNGHRYA KAAIDIAAHD LMGKAWGVRV ADLLGGAVTE RVPSYYASGV GEPDEIARIA AERADEGYPR MQVKIGGRPV EIDIETIRKV WERVGTRMRL AVDGNRGLTT RDALRLSREC PEIPFILEQP CNSIEEIAAI RGQLHHAVYL DETAEDVATV LRAVGQGVCD GFGMKVTRIG GLRPMAVFRD ICEVRSMPHT CDDAWGGDII AAACTHIGAT VQPRLMEGVW LAQPYIEGHF DPENGLRIEG GHIRLPEGPG LGIVPDESLF GAPVASFG
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