Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSP_4006 |
Symbol | |
ID | 3711781 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodobacter sphaeroides 2.4.1 |
Kingdom | Bacteria |
Replicon accession | NC_007488 |
Strand | + |
Start bp | 41999 |
End bp | 42733 |
Gene Length | 735 bp |
Protein Length | 244 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 640069332 |
Product | Short-chain dehydrogenase/reductase SDR |
Protein accession | YP_345199 |
Protein GI | 77404625 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism [R] General function prediction only |
COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.563723 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCAGGGGT TCGAGGGGAA GGTGGCGCTG GTGACCGGTG CCGCGGGTGG TATCGGCGGC GCGGTGGTGA CGGCGCTCCG TGCCGCGGGT GCGCGCGTGG CGGTGGCCGA CCGCGCGGTG GCGGGGATCG CGGCCGATCT GCATCTGCCG GGCGACCTGC GCGAGGCGGC TTACGCGGAC GGGCTGCCGG GCGCGGTGGC GGCGGGGCTG GGCCGGCTCG ACATCGTGGT GAACAATGCG GGCGTCATCT CCCGCGGCAG GATCACCGAG ACGACGGATG CCGACTGGTC GCTCTCGCTC GGCGTCAATG TCGAGGCCCC GTTCCGCATC TGCCGCGCGG CGATCCCGCT GATGGCGGCG GCGGGCGGCG GCGCCATCGT CAATGTGGCC TCCTGCTGGG GGCTGCGGCC GGGGCCGGGC CATGCGCTCT ACTGCCTGAC GAAGGCCGCG CTCGCCTCGC TCACGCAATG CATGGGGATG GACCATGCGC CTCAGGGCAT CCGCATCAAC GCGGTCTGCC CGAACGAGGT GAACACGCCG ATGCTGCGCA CGGGCTTCGC GAAGCGCGGC TTCGACCCGG ATCGGGCGGT GGCGGAGCTG GGCCGCACCG TGCCTCTGGG CCGCATCGCC GAGCCCGAGG ACATTGCCGA TGTGGTGCTG TTCCTCGCCT CGGATGCCGC GCGCTACCTC TGCGGCTCTC TCGTCGAGGT CAATGGCGGG AAGGCCGTCG CATGA
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Protein sequence | MQGFEGKVAL VTGAAGGIGG AVVTALRAAG ARVAVADRAV AGIAADLHLP GDLREAAYAD GLPGAVAAGL GRLDIVVNNA GVISRGRITE TTDADWSLSL GVNVEAPFRI CRAAIPLMAA AGGGAIVNVA SCWGLRPGPG HALYCLTKAA LASLTQCMGM DHAPQGIRIN AVCPNEVNTP MLRTGFAKRG FDPDRAVAEL GRTVPLGRIA EPEDIADVVL FLASDAARYL CGSLVEVNGG KAVA
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