Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSP_4005 |
Symbol | |
ID | 3711783 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodobacter sphaeroides 2.4.1 |
Kingdom | Bacteria |
Replicon accession | NC_007488 |
Strand | - |
Start bp | 43470 |
End bp | 44810 |
Gene Length | 1341 bp |
Protein Length | 446 aa |
Translation table | 11 |
GC content | 75% |
IMG OID | 640069334 |
Product | oxidoreductase, NAD-binding site |
Protein accession | YP_345201 |
Protein GI | 77404627 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0665] Glycine/D-amino acid oxidases (deaminating) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.0756508 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACCAGCT TCGAGGCGCG GCGGACCCCG GTCCACCGCG GCCCGGCGGC CTGGTCCGCC ATCCTGCCCG GCCAGCCCGC ACCGCAGCCG CTCGAGGGCG ACGCCACCGC GGACGTGGCG GTGGTGGGGG CGGGCTTTGC CGGGCTCTCG GCCGCGCGGC GGCTCCTGCA GCTCGATCCC CGCGCCCGGG TCGTGGTGCT CGAGGCCGGC CGCATCGCCG AGGGGGCCTC GGGGCGCAAC TCGGGCTTCA TGATCGACCT GCCGCACGAC ATCGCCTCCG ACGACTATAC CGGCCACGGC AGCGACGCGG CCATGATCGG GCTGAACCGG CAGGCCATCG CCTTCGCGCG GCAGGCGGTC GAGGAGCATG CCATCCCGGC CGCCTTCTTC GACCCCGCGG GCAAGGTCAA TGGCGCGGCA AGCCCCGCGG CCGACCGGCT GAACGCGGCC TATGCCCGCC ATCTGGCCAC GCTGGGCGAG CCGAGCGAGC GGCTCGACGC GCAGGCCATG GCCGAGCTCA CCGGCTCGCG CCACTACCTG TCGGGGCTCT TCACGCCGGG CACGGTGATG CTGCAGCCCG CGGGTTACAT CCGCGCGCTG GCCGAGGGCC TCAGGGCCGC GGGCGTGCGC ATCGCCGAGA CGAGCCCCGT CCTCCGGCTC GCGCGGCAGG GCGCGGGCTG GCAGCTTGTC ACGCCGCACG GCCGGATCGC CGCGGGCAAG GTGATCCTCG CCAACAACGG CCAGATCGAG AGCTTCGGCT TCGCCCGCGG CCGGCTCATG CATCTCTTCC TCTATGCCTC GATGACGGCG GATCTCGGCC CCGAGGCGCT GCGCACGCTG GGCGGTGCGC CGCGCTGGGG GATCACGCCC TCGGACCCGA TGGGCACCAC CATGCGCCGG ATCGACGGGC CGCAGGGCGG CAACCGCATC GTCACGCGCA CCTGCGCCAG CTTCGAGCCC GGCATGGAGG CGAGCGAGGC CGCGCTCCGC CGCACCGCCG CCGTCCACCG CTGCAAGTTC GCCGAACGTT TCCCGGCCCT CGGGTCCGTG CGGATGGAGT TCAGCTGGGC GGGCCACCTC TGCCTCAGCC GCAACGGCGT GGCCCTGATG CGCGAGCTCG AGCCCGGGCT CTTTGCGGCC TGCGTGCAGA ACGGCCTCGG CACCACGCGC GGCACCCTGA CGGGGATCGG CGCGGCGGAA CTCGCCTCGG GCGTCGAGAG CGCGGTCACG CGCCATTTCG TCGCCGAGGC GGATCCCACG CCCCTGCCGC CCGAGCCGCT GGCAACCCTC GGGGCCTCGG CCTATCTGCG CTGGAAGGAA TGGCGCGCTG CGGCCGAGTA G
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Protein sequence | MTSFEARRTP VHRGPAAWSA ILPGQPAPQP LEGDATADVA VVGAGFAGLS AARRLLQLDP RARVVVLEAG RIAEGASGRN SGFMIDLPHD IASDDYTGHG SDAAMIGLNR QAIAFARQAV EEHAIPAAFF DPAGKVNGAA SPAADRLNAA YARHLATLGE PSERLDAQAM AELTGSRHYL SGLFTPGTVM LQPAGYIRAL AEGLRAAGVR IAETSPVLRL ARQGAGWQLV TPHGRIAAGK VILANNGQIE SFGFARGRLM HLFLYASMTA DLGPEALRTL GGAPRWGITP SDPMGTTMRR IDGPQGGNRI VTRTCASFEP GMEASEAALR RTAAVHRCKF AERFPALGSV RMEFSWAGHL CLSRNGVALM RELEPGLFAA CVQNGLGTTR GTLTGIGAAE LASGVESAVT RHFVAEADPT PLPPEPLATL GASAYLRWKE WRAAAE
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