Gene RSP_4000 details

Gene Information

• Locus tag: RSP_4000
• Symbol: proV
• ID: 3711787
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Rhodobacter sphaeroides 2.4.1
• Kingdom: Bacteria
• Replicon accession: NC_007488
• Strand: +
• Start bp: 48080
• End bp: 49168
• Gene Length: 1089 bp
• Protein Length: 362 aa
• Translation table: 11
• GC content: 67%
• IMG OID: 640069338
• Product: glycine betaine/L-proline ABC transporter ATPase
• Protein accession: YP_345205
• Protein GI: 77404631
• COG category: [E] Amino acid transport and metabolism
• COG ID: [COG4175] ABC-type proline/glycine betaine transport system, ATPase component
• TIGRFAM ID: [TIGR01186] glycine betaine/L-proline transport ATP binding subunit

Plasmid Coverage information

• Num covering plasmid clones: 12
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACCAAAT CCGCAAGAGA GGACGTCATC CGCTGCGAGG GGATCTGGAA GATCTTCGGC 
CGCAGGTCGC GTCAGGCGAT GGAGGCCGTC CGCAGCGGGG GCCTGTCGAA GACCGAGATC 
CGGGAACGGT TCGACTGCGT GGTGGGGGTG CAGGACGCCT CCTTCAGCGT GAAGCGCGGC 
GAGATCTTCT GCATCATGGG CCTGTCCGGC TCGGGCAAGT CGACGCTGAT CCGGCACATC 
AACCGGCTGA TCGAGCCCAC TTCCGGCTCG GTCTTCATCG AGGGGCAGAA CGTCAATGCG 
ATGAACGCCC GCGACCTGCG CGCGCTGCGG GCCCAGCGGA TCGGCATGGT GTTCCAGAGC 
ATGGCGTTGA TGCCGCACCG GACGGTGCGC GACAATGTCG TCTTCTCGCT CGAGGTGCGG 
GGCCGGCCCG AGGAGGAGCG CGCACGGGTT GCGGCGCAGG CCATCGAGGC GGTGGACCTG 
ACGGGATGGG AAACGAAATA TCCCGACGAG CTGTCGGGGG GAATGCAGCA GCGCGTGGGC 
TTGGCCCGTG CCATCGCTGC CGACCCGACC ATCCTGCTGA TGGACGAGCC CTTCTCGGCG 
CTCGACCCGC TGATCCGCAA GCAGCTTCAG ACCACCTTCA TGGCCCTCTC GGCCGAGCTG 
CACAAGACCA CGGTCTTCAT CACCCACGAC CTCGACGAGG CCATCCGCAT CGGTGACCGG 
ATCGCGATCA TGAAGGACGG GGTGCTGGTG CAGATCGGCA CGCCCGAAGA GATCGTGACC 
GAGCCGGCCG ACGAGTATGT GGCCGATTTC GTGGCCGGGA TCTCGAAGCT CGACCTCGTG 
TCGGCGGCGC GCATCATGCA GCCCTTCGAG CAGTATCGCC GGACGCGGCC CACGGACGGG 
ATCGAGGCCT GGCCGGTGGC GCGCCCCGAC GACAAGCTGA ACCGGCTCGT CGATCTGGCG 
GTCGGCACCG ATCATCCGAT CCTCATCAAG GATGCGGACG CCGTGGTGGG TGTCGTGGGA 
AAGCGTGCGC TCCTGCGCGG CATCCAGGGC CGCGAGGACG CGGCCGCTTG CCAGGCGGAG 
GCCGTCTGA 

 

Protein sequence

MTKSAREDVI RCEGIWKIFG RRSRQAMEAV RSGGLSKTEI RERFDCVVGV QDASFSVKRG 
EIFCIMGLSG SGKSTLIRHI NRLIEPTSGS VFIEGQNVNA MNARDLRALR AQRIGMVFQS 
MALMPHRTVR DNVVFSLEVR GRPEEERARV AAQAIEAVDL TGWETKYPDE LSGGMQQRVG 
LARAIAADPT ILLMDEPFSA LDPLIRKQLQ TTFMALSAEL HKTTVFITHD LDEAIRIGDR 
IAIMKDGVLV QIGTPEEIVT EPADEYVADF VAGISKLDLV SAARIMQPFE QYRRTRPTDG 
IEAWPVARPD DKLNRLVDLA VGTDHPILIK DADAVVGVVG KRALLRGIQG REDAAACQAE 
AV