Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSP_3988 |
Symbol | |
ID | 3711810 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodobacter sphaeroides 2.4.1 |
Kingdom | Bacteria |
Replicon accession | NC_007488 |
Strand | + |
Start bp | 62823 |
End bp | 65204 |
Gene Length | 2382 bp |
Protein Length | 793 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 640069351 |
Product | glycosyltransferase |
Protein accession | YP_345218 |
Protein GI | 77404644 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG3754] Lipopolysaccharide biosynthesis protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCGACC TCGACGACCT CTGGCGCAGC CTCGCACCCG GGCAGGTGCT TGCCGAAAGG CCGGATTTCC GCCGCCCGCC GGTCGGAGAA GCCAGCGTCT ACGACGAGCT GAAGGCGCAG ATTTCCGGGC TCGACAAGGT GCTGGAGGAC CTGACGACCC TGCCCGCCCT GTCGGAGGCC ATTGCCCTCG GCGAACCCGA CGCCTGCCAT CTGGCCTGCG AACTGATCCG TCTGGGCGAT CCGGTCGACC GGGCCGTGTC GGATTTCTCG CACGAGGCCT ACCGGGCCTG GTATCCCGAC ATCGCGAAGG CGAAGATCGA TCCCTTCCTC CACTATCTCG AACACGGCTG GAAGGAGGGG CGGCGCACGC TGGCGAGTCT GCGCGACAAG CACCACGCCG GGCGGCGGAC CTACAACCCA AACGTGCAGA CCTGCCTCAT CGCCGTGCAC GAGCTGTCGC GGACCGGCGC CCCTGTGGTG GGGCTCGATC TGGCGCGCGA GGCGGCCGAG ACTTGCAATG TGGTTGTCGT CGCAGTGCGG GGCGGCGCCC TGCTGGAGGA TTTTATCGAT CATGTCTGCG ATCTTGTGAT TTCGGAAAAT CCTTTTGGGG ATATTCTTTT TCTCTCTCAA GAAAGTTTCA CCAGGATAGA TTTCGCGATC CTCAATTCGG TGGAGGCCGT TCCGCTCGTT CGCTATGCCG TCGCGCGGGA CATTCCCTTC GCGACCTATA TTCACGAATA TACCGATTAC ACCTATCCGA ATTACAAGGT GACATTGACC TCGCTCTTTT CCGATCTGCT GATCTTTTCC TCGGATCACG TCCGGCAAAG CTGGACCGGT TGGCTACGCG ACGTGGAGTG CGACATCGAC CGCGACACGC GGATCCTGCC GCAGCGCCCG GTCCGGATGG GAGGCTGCAC CGAGGACCGC ATCCGCGAGG CGCGGGAGCG GATCTCGGCG CTGATCGGGC GCGACTGCGC GCATGTGCGC CTCGTCTGCG GCGCGGGGCA TCTCCAGTGG CGCAAGGGCC CCGACATCTT CGCCATGGCG GCCCAGATCT GCGCGGCGCG CGATCCCGAC ACGCTGTTCC TCTGGATCGG CGACGGGCTC AATCCCGAGG ACATGGAGTT CGGGGTATGG ATGAGCTACC ACCTGCGCCA GATCGGCGCG GGGCGGCCCG AGGGCAATCT CTTCCTGCTG CCGGCGGGGC CGGCCTATCC GGATGTGCTC GCGGCCGCGG ATGCGATGTT CGTCTCGTCG CGGCTCGATC CGCTGCCGAA CGTCGTGTTC GACGCGCTGG CGGCCGGGTG CCGGATCGTG CTCTTCGAGG GGGCGAGCGG CTTCGGCGAT GCGGTCTACC GCCGATCGGG CCGGATCCGC ACCGTCGAAT ATGGCAATCC CGCCGCCGCG GCCGAGGCGC TGCTCGACCT GCCGCGGAAG ACCCCCGGGC CCGCGCGCGA GGCTGCGCCC GAGGCGGACG GGCTCTTCGC CCGCATCCGC CGCGCGCTCC TCGACCGGCT CGCCACGCAG CGCTACTTCG TGCGCGGCGC GAGCGAGATC GACGCGCCGA TGCTCTTCCA CGAGCCGGAG CAGGCCGAGT TCCGCATCCT CGAGCGCGAG AAGATGATGC GCTACGGCCG CCGCCGCATG TGGCGCGATC TGGCCGAGGT CGAGGAGAGG CTGGCGGACG CCGACAACTG GGTCCACCGC AAGCTGCGGA TCGCCCCCTA CGGCACCGCA GAAGCCACGG AGCTGCCGCG CTTTTCGCTG CATGTCCATG CCTTCTACAC CGACGATCTG GCGCAGGACG TGCGCCGGCA CGCGGCCTAC CGCTGTGCCA GCCGGATCGT CGTCACCACC GACAGCGACC GGAAGGCGGA CGAGATCCGC ACGCTGATGG CGGCGGTGGG GCTTGCGCCC GAGGTGCTGG TCCGGCCCAA CCGCGGGCGC GACATCCTGC CCTTCCTGCA GCTCTTCCTG CCCGGGGGCG CGGCGGGCGA GGACGAGATC TGGTGCCACC TGCATCAGAA GAAGTCGCTC GCCACCACGG ACAGCGGCGA CATCTGGCGC GCCTTCCTCC TGCGCATCCT CCTCGGGGAT GAGGCGTCCC TGTCGGATGC GGCGACGAAT CTGCGCAACC CAGGCGTGGG CCTCGTGGCG CCGTTCGATC CCTATTTCAT CCCGTGGGAC GCCTCGCGCG CGCTGCTGCC GCGGGTCGCG CCGCGCCTGC CGGGCCCGCT GCCCGACAAT CCGCTGCTCT TCCCGGTGGG CAACATGTTC TTTGTCCGCA GCGCGGTGGT GCGGGCGATG AACGACCTGT TCGGCGCGGG CTACCCTGGC CCAACGAACC CATTCCCAAC GACGGGACCG AGTTTCATCT GA
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Protein sequence | MSDLDDLWRS LAPGQVLAER PDFRRPPVGE ASVYDELKAQ ISGLDKVLED LTTLPALSEA IALGEPDACH LACELIRLGD PVDRAVSDFS HEAYRAWYPD IAKAKIDPFL HYLEHGWKEG RRTLASLRDK HHAGRRTYNP NVQTCLIAVH ELSRTGAPVV GLDLAREAAE TCNVVVVAVR GGALLEDFID HVCDLVISEN PFGDILFLSQ ESFTRIDFAI LNSVEAVPLV RYAVARDIPF ATYIHEYTDY TYPNYKVTLT SLFSDLLIFS SDHVRQSWTG WLRDVECDID RDTRILPQRP VRMGGCTEDR IREARERISA LIGRDCAHVR LVCGAGHLQW RKGPDIFAMA AQICAARDPD TLFLWIGDGL NPEDMEFGVW MSYHLRQIGA GRPEGNLFLL PAGPAYPDVL AAADAMFVSS RLDPLPNVVF DALAAGCRIV LFEGASGFGD AVYRRSGRIR TVEYGNPAAA AEALLDLPRK TPGPAREAAP EADGLFARIR RALLDRLATQ RYFVRGASEI DAPMLFHEPE QAEFRILERE KMMRYGRRRM WRDLAEVEER LADADNWVHR KLRIAPYGTA EATELPRFSL HVHAFYTDDL AQDVRRHAAY RCASRIVVTT DSDRKADEIR TLMAAVGLAP EVLVRPNRGR DILPFLQLFL PGGAAGEDEI WCHLHQKKSL ATTDSGDIWR AFLLRILLGD EASLSDAATN LRNPGVGLVA PFDPYFIPWD ASRALLPRVA PRLPGPLPDN PLLFPVGNMF FVRSAVVRAM NDLFGAGYPG PTNPFPTTGP SFI
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