Gene RSP_3988 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRSP_3988 
Symbol 
ID3711810 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides 2.4.1 
KingdomBacteria 
Replicon accessionNC_007488 
Strand
Start bp62823 
End bp65204 
Gene Length2382 bp 
Protein Length793 aa 
Translation table11 
GC content68% 
IMG OID640069351 
Productglycosyltransferase 
Protein accessionYP_345218 
Protein GI77404644 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG3754] Lipopolysaccharide biosynthesis protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCGACC TCGACGACCT CTGGCGCAGC CTCGCACCCG GGCAGGTGCT TGCCGAAAGG 
CCGGATTTCC GCCGCCCGCC GGTCGGAGAA GCCAGCGTCT ACGACGAGCT GAAGGCGCAG
ATTTCCGGGC TCGACAAGGT GCTGGAGGAC CTGACGACCC TGCCCGCCCT GTCGGAGGCC
ATTGCCCTCG GCGAACCCGA CGCCTGCCAT CTGGCCTGCG AACTGATCCG TCTGGGCGAT
CCGGTCGACC GGGCCGTGTC GGATTTCTCG CACGAGGCCT ACCGGGCCTG GTATCCCGAC
ATCGCGAAGG CGAAGATCGA TCCCTTCCTC CACTATCTCG AACACGGCTG GAAGGAGGGG
CGGCGCACGC TGGCGAGTCT GCGCGACAAG CACCACGCCG GGCGGCGGAC CTACAACCCA
AACGTGCAGA CCTGCCTCAT CGCCGTGCAC GAGCTGTCGC GGACCGGCGC CCCTGTGGTG
GGGCTCGATC TGGCGCGCGA GGCGGCCGAG ACTTGCAATG TGGTTGTCGT CGCAGTGCGG
GGCGGCGCCC TGCTGGAGGA TTTTATCGAT CATGTCTGCG ATCTTGTGAT TTCGGAAAAT
CCTTTTGGGG ATATTCTTTT TCTCTCTCAA GAAAGTTTCA CCAGGATAGA TTTCGCGATC
CTCAATTCGG TGGAGGCCGT TCCGCTCGTT CGCTATGCCG TCGCGCGGGA CATTCCCTTC
GCGACCTATA TTCACGAATA TACCGATTAC ACCTATCCGA ATTACAAGGT GACATTGACC
TCGCTCTTTT CCGATCTGCT GATCTTTTCC TCGGATCACG TCCGGCAAAG CTGGACCGGT
TGGCTACGCG ACGTGGAGTG CGACATCGAC CGCGACACGC GGATCCTGCC GCAGCGCCCG
GTCCGGATGG GAGGCTGCAC CGAGGACCGC ATCCGCGAGG CGCGGGAGCG GATCTCGGCG
CTGATCGGGC GCGACTGCGC GCATGTGCGC CTCGTCTGCG GCGCGGGGCA TCTCCAGTGG
CGCAAGGGCC CCGACATCTT CGCCATGGCG GCCCAGATCT GCGCGGCGCG CGATCCCGAC
ACGCTGTTCC TCTGGATCGG CGACGGGCTC AATCCCGAGG ACATGGAGTT CGGGGTATGG
ATGAGCTACC ACCTGCGCCA GATCGGCGCG GGGCGGCCCG AGGGCAATCT CTTCCTGCTG
CCGGCGGGGC CGGCCTATCC GGATGTGCTC GCGGCCGCGG ATGCGATGTT CGTCTCGTCG
CGGCTCGATC CGCTGCCGAA CGTCGTGTTC GACGCGCTGG CGGCCGGGTG CCGGATCGTG
CTCTTCGAGG GGGCGAGCGG CTTCGGCGAT GCGGTCTACC GCCGATCGGG CCGGATCCGC
ACCGTCGAAT ATGGCAATCC CGCCGCCGCG GCCGAGGCGC TGCTCGACCT GCCGCGGAAG
ACCCCCGGGC CCGCGCGCGA GGCTGCGCCC GAGGCGGACG GGCTCTTCGC CCGCATCCGC
CGCGCGCTCC TCGACCGGCT CGCCACGCAG CGCTACTTCG TGCGCGGCGC GAGCGAGATC
GACGCGCCGA TGCTCTTCCA CGAGCCGGAG CAGGCCGAGT TCCGCATCCT CGAGCGCGAG
AAGATGATGC GCTACGGCCG CCGCCGCATG TGGCGCGATC TGGCCGAGGT CGAGGAGAGG
CTGGCGGACG CCGACAACTG GGTCCACCGC AAGCTGCGGA TCGCCCCCTA CGGCACCGCA
GAAGCCACGG AGCTGCCGCG CTTTTCGCTG CATGTCCATG CCTTCTACAC CGACGATCTG
GCGCAGGACG TGCGCCGGCA CGCGGCCTAC CGCTGTGCCA GCCGGATCGT CGTCACCACC
GACAGCGACC GGAAGGCGGA CGAGATCCGC ACGCTGATGG CGGCGGTGGG GCTTGCGCCC
GAGGTGCTGG TCCGGCCCAA CCGCGGGCGC GACATCCTGC CCTTCCTGCA GCTCTTCCTG
CCCGGGGGCG CGGCGGGCGA GGACGAGATC TGGTGCCACC TGCATCAGAA GAAGTCGCTC
GCCACCACGG ACAGCGGCGA CATCTGGCGC GCCTTCCTCC TGCGCATCCT CCTCGGGGAT
GAGGCGTCCC TGTCGGATGC GGCGACGAAT CTGCGCAACC CAGGCGTGGG CCTCGTGGCG
CCGTTCGATC CCTATTTCAT CCCGTGGGAC GCCTCGCGCG CGCTGCTGCC GCGGGTCGCG
CCGCGCCTGC CGGGCCCGCT GCCCGACAAT CCGCTGCTCT TCCCGGTGGG CAACATGTTC
TTTGTCCGCA GCGCGGTGGT GCGGGCGATG AACGACCTGT TCGGCGCGGG CTACCCTGGC
CCAACGAACC CATTCCCAAC GACGGGACCG AGTTTCATCT GA
 
Protein sequence
MSDLDDLWRS LAPGQVLAER PDFRRPPVGE ASVYDELKAQ ISGLDKVLED LTTLPALSEA 
IALGEPDACH LACELIRLGD PVDRAVSDFS HEAYRAWYPD IAKAKIDPFL HYLEHGWKEG
RRTLASLRDK HHAGRRTYNP NVQTCLIAVH ELSRTGAPVV GLDLAREAAE TCNVVVVAVR
GGALLEDFID HVCDLVISEN PFGDILFLSQ ESFTRIDFAI LNSVEAVPLV RYAVARDIPF
ATYIHEYTDY TYPNYKVTLT SLFSDLLIFS SDHVRQSWTG WLRDVECDID RDTRILPQRP
VRMGGCTEDR IREARERISA LIGRDCAHVR LVCGAGHLQW RKGPDIFAMA AQICAARDPD
TLFLWIGDGL NPEDMEFGVW MSYHLRQIGA GRPEGNLFLL PAGPAYPDVL AAADAMFVSS
RLDPLPNVVF DALAAGCRIV LFEGASGFGD AVYRRSGRIR TVEYGNPAAA AEALLDLPRK
TPGPAREAAP EADGLFARIR RALLDRLATQ RYFVRGASEI DAPMLFHEPE QAEFRILERE
KMMRYGRRRM WRDLAEVEER LADADNWVHR KLRIAPYGTA EATELPRFSL HVHAFYTDDL
AQDVRRHAAY RCASRIVVTT DSDRKADEIR TLMAAVGLAP EVLVRPNRGR DILPFLQLFL
PGGAAGEDEI WCHLHQKKSL ATTDSGDIWR AFLLRILLGD EASLSDAATN LRNPGVGLVA
PFDPYFIPWD ASRALLPRVA PRLPGPLPDN PLLFPVGNMF FVRSAVVRAM NDLFGAGYPG
PTNPFPTTGP SFI