Gene RSP_3984 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRSP_3984 
SymbolkaiC2 
ID3711813 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides 2.4.1 
KingdomBacteria 
Replicon accessionNC_007488 
Strand
Start bp68311 
End bp70023 
Gene Length1713 bp 
Protein Length570 aa 
Translation table11 
GC content68% 
IMG OID640069354 
Productcircadian clock protein KaiC 
Protein accessionYP_345221 
Protein GI77404647 
COG category[T] Signal transduction mechanisms 
COG ID[COG0467] RecA-superfamily ATPases implicated in signal transduction 
TIGRFAM ID[TIGR02655] circadian clock protein KaiC 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.612648 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACGTCTC AGTTGGGGAT CGGCAAGTCG CCGACCGGCA TCCAGGGGTT CGACGAGCTG 
ACACTCGGCG GACTGCCCAC CGGACGCCCG AGCCTCGTCT GCGGGTCCGC GGGCTGCGGC
AAGACCCTGT TCGCCTCCAC CTTCCTCATC AACGGCGTGC GCGACCACGG CGAGCCGGGC
GTCTTCGTGA CCTTCGAGGA GCGCCCCGAG GACATCGTGA ACAACGTGGC CTCGCTGGGC
TTCGAGCTCG ACAAGCTGAT CGAGGAAGAG AAGATCGCGA TCGAACATAT CGCGGTCGAT
CCCTCCGAAG TGGCCGAGAT CGGCGACTAC GACCTCGAGG GGCTGTTCCT GCGACTGGAG
CTGGCCATCG ACACGGTGGG CGCCAAGCGC GTGGTTCTCG ACACGATCGA AAGCCTGTTC
TCGGCCTTCT CGAACCCCGC GATCCTGCGG GCCGAGATCC GGCGGCTGTT CGACTGGCTG
AAGGAGCGCG GGCTCACCAC CGTCATCACC GCCGAGCGGG GCGACGGCGC GCTGACGCGG
CAGGGGCTCG AGGAATATGT CTCGGACTGC GTGATCCTGC TCGACCACCG GGTCGAGAAC
CAGATCTCGA CCCGCCGCCT GCGCATCGTG AAATACCGCG GCACGGCGCA CGGGACCAAC
GAATATCCGT TCCTGATCGA CACCGACGGC TTCTCGGTGC TGCCCGTCAG CGCGCTGGGG
CTGCTGCATC AGGTCCATGA GGAGCGCATC GCCTCGGGCG TGCCCGATCT CGATGCGATG
ATGGCGGGCG GCGGCTTCTT CCGCGGCTCC TCGATCCTCG TCTCGGGCGT GGCCGGCGCG
GGCAAATCCT CGCTCGCCGC CCATTTCGCC GCCGCCGCCT GCGCGCGGGG CGAGCGGGCC
ATGTATTTCT CCTTCGAGGA GGCGGCCGAT CAGGCGGTGC GCAACATGCG CTCGCTGGGC
CTCGATCTCG GGCGCTGGCG CGACGCGGGC CTGCTGCGCT TCATGGCGAC GCGGCCCACC
TTCTACAGCC TCGAGATGCA TCTGGCGGTG ATCCTGCGCG AGGTGATGCG CTTCGAGCCC
TCCGTCGTGG TGCTCGACCC GATCTCGGCC TTCACCGAGA GCGGCGACCG GCTCGAGGTG
CAGTCGATGC TGCTGCGGAT CGTCGATTTC CTCAAGAACC GCGGCATCAC CGGCATCTTC
ACCCATCTCG CCCACAGCCA GAACGAGGCC ACGACCGATG CGGGCCTGTC GTCGCTGATG
GATGGCTGGG TGCTGATGCT GAACCGCGAG GTGAATGGCG AGTTCAACCG CGAGCTCTAT
CTGCTCAAGG CCCGCGGCAT GGCCCATTCG AACCAGGTGC GCGAGTTCCT GATGAGCGAT
CGCGGCATCT CGCTCCTGCC GCCGCATCTG GGCGAGGGCG GGGCGCTCAC CGGCACCGCC
CGCAAGGCCG AGGAGGCGCG GCTGCGCCGG GCCGAGATCG AGCGGCAGAC CGAGCTCGGC
CGGCTCCAGC AGCAGATCGA GCAGCGCCGC CGCCGGGCGC GCGCGCAGAT CGAGGCGCTC
GAGGCGGAGC TGCAGGCCGA GGAGATCGCG CTCAAGGCGC TGGTGGAGAG CGAGAGCGCG
CACGAGCGAC AACGGCTGGC CGATGCCGAT ACCCTGGCCC GAAGCCGCGG AAACGAGCGT
TTCGCGGACC TCTTGATGAA TAAGGGAGAG TGA
 
Protein sequence
MTSQLGIGKS PTGIQGFDEL TLGGLPTGRP SLVCGSAGCG KTLFASTFLI NGVRDHGEPG 
VFVTFEERPE DIVNNVASLG FELDKLIEEE KIAIEHIAVD PSEVAEIGDY DLEGLFLRLE
LAIDTVGAKR VVLDTIESLF SAFSNPAILR AEIRRLFDWL KERGLTTVIT AERGDGALTR
QGLEEYVSDC VILLDHRVEN QISTRRLRIV KYRGTAHGTN EYPFLIDTDG FSVLPVSALG
LLHQVHEERI ASGVPDLDAM MAGGGFFRGS SILVSGVAGA GKSSLAAHFA AAACARGERA
MYFSFEEAAD QAVRNMRSLG LDLGRWRDAG LLRFMATRPT FYSLEMHLAV ILREVMRFEP
SVVVLDPISA FTESGDRLEV QSMLLRIVDF LKNRGITGIF THLAHSQNEA TTDAGLSSLM
DGWVLMLNRE VNGEFNRELY LLKARGMAHS NQVREFLMSD RGISLLPPHL GEGGALTGTA
RKAEEARLRR AEIERQTELG RLQQQIEQRR RRARAQIEAL EAELQAEEIA LKALVESESA
HERQRLADAD TLARSRGNER FADLLMNKGE