| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSP_3984 |
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| Symbol | kaiC2 |
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| ID | 3711813 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodobacter sphaeroides 2.4.1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007488 |
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| Strand | + |
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| Start bp | 68311 |
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| End bp | 70023 |
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| Gene Length | 1713 bp |
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| Protein Length | 570 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 640069354 |
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| Product | circadian clock protein KaiC |
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| Protein accession | YP_345221 |
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| Protein GI | 77404647 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0467] RecA-superfamily ATPases implicated in signal transduction |
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| TIGRFAM ID | [TIGR02655] circadian clock protein KaiC |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.612648 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACGTCTC AGTTGGGGAT CGGCAAGTCG CCGACCGGCA TCCAGGGGTT CGACGAGCTG
ACACTCGGCG GACTGCCCAC CGGACGCCCG AGCCTCGTCT GCGGGTCCGC GGGCTGCGGC
AAGACCCTGT TCGCCTCCAC CTTCCTCATC AACGGCGTGC GCGACCACGG CGAGCCGGGC
GTCTTCGTGA CCTTCGAGGA GCGCCCCGAG GACATCGTGA ACAACGTGGC CTCGCTGGGC
TTCGAGCTCG ACAAGCTGAT CGAGGAAGAG AAGATCGCGA TCGAACATAT CGCGGTCGAT
CCCTCCGAAG TGGCCGAGAT CGGCGACTAC GACCTCGAGG GGCTGTTCCT GCGACTGGAG
CTGGCCATCG ACACGGTGGG CGCCAAGCGC GTGGTTCTCG ACACGATCGA AAGCCTGTTC
TCGGCCTTCT CGAACCCCGC GATCCTGCGG GCCGAGATCC GGCGGCTGTT CGACTGGCTG
AAGGAGCGCG GGCTCACCAC CGTCATCACC GCCGAGCGGG GCGACGGCGC GCTGACGCGG
CAGGGGCTCG AGGAATATGT CTCGGACTGC GTGATCCTGC TCGACCACCG GGTCGAGAAC
CAGATCTCGA CCCGCCGCCT GCGCATCGTG AAATACCGCG GCACGGCGCA CGGGACCAAC
GAATATCCGT TCCTGATCGA CACCGACGGC TTCTCGGTGC TGCCCGTCAG CGCGCTGGGG
CTGCTGCATC AGGTCCATGA GGAGCGCATC GCCTCGGGCG TGCCCGATCT CGATGCGATG
ATGGCGGGCG GCGGCTTCTT CCGCGGCTCC TCGATCCTCG TCTCGGGCGT GGCCGGCGCG
GGCAAATCCT CGCTCGCCGC CCATTTCGCC GCCGCCGCCT GCGCGCGGGG CGAGCGGGCC
ATGTATTTCT CCTTCGAGGA GGCGGCCGAT CAGGCGGTGC GCAACATGCG CTCGCTGGGC
CTCGATCTCG GGCGCTGGCG CGACGCGGGC CTGCTGCGCT TCATGGCGAC GCGGCCCACC
TTCTACAGCC TCGAGATGCA TCTGGCGGTG ATCCTGCGCG AGGTGATGCG CTTCGAGCCC
TCCGTCGTGG TGCTCGACCC GATCTCGGCC TTCACCGAGA GCGGCGACCG GCTCGAGGTG
CAGTCGATGC TGCTGCGGAT CGTCGATTTC CTCAAGAACC GCGGCATCAC CGGCATCTTC
ACCCATCTCG CCCACAGCCA GAACGAGGCC ACGACCGATG CGGGCCTGTC GTCGCTGATG
GATGGCTGGG TGCTGATGCT GAACCGCGAG GTGAATGGCG AGTTCAACCG CGAGCTCTAT
CTGCTCAAGG CCCGCGGCAT GGCCCATTCG AACCAGGTGC GCGAGTTCCT GATGAGCGAT
CGCGGCATCT CGCTCCTGCC GCCGCATCTG GGCGAGGGCG GGGCGCTCAC CGGCACCGCC
CGCAAGGCCG AGGAGGCGCG GCTGCGCCGG GCCGAGATCG AGCGGCAGAC CGAGCTCGGC
CGGCTCCAGC AGCAGATCGA GCAGCGCCGC CGCCGGGCGC GCGCGCAGAT CGAGGCGCTC
GAGGCGGAGC TGCAGGCCGA GGAGATCGCG CTCAAGGCGC TGGTGGAGAG CGAGAGCGCG
CACGAGCGAC AACGGCTGGC CGATGCCGAT ACCCTGGCCC GAAGCCGCGG AAACGAGCGT
TTCGCGGACC TCTTGATGAA TAAGGGAGAG TGA
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| Protein sequence | MTSQLGIGKS PTGIQGFDEL TLGGLPTGRP SLVCGSAGCG KTLFASTFLI NGVRDHGEPG
VFVTFEERPE DIVNNVASLG FELDKLIEEE KIAIEHIAVD PSEVAEIGDY DLEGLFLRLE
LAIDTVGAKR VVLDTIESLF SAFSNPAILR AEIRRLFDWL KERGLTTVIT AERGDGALTR
QGLEEYVSDC VILLDHRVEN QISTRRLRIV KYRGTAHGTN EYPFLIDTDG FSVLPVSALG
LLHQVHEERI ASGVPDLDAM MAGGGFFRGS SILVSGVAGA GKSSLAAHFA AAACARGERA
MYFSFEEAAD QAVRNMRSLG LDLGRWRDAG LLRFMATRPT FYSLEMHLAV ILREVMRFEP
SVVVLDPISA FTESGDRLEV QSMLLRIVDF LKNRGITGIF THLAHSQNEA TTDAGLSSLM
DGWVLMLNRE VNGEFNRELY LLKARGMAHS NQVREFLMSD RGISLLPPHL GEGGALTGTA
RKAEEARLRR AEIERQTELG RLQQQIEQRR RRARAQIEAL EAELQAEEIA LKALVESESA
HERQRLADAD TLARSRGNER FADLLMNKGE
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