Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSP_3978 |
Symbol | |
ID | 3711819 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodobacter sphaeroides 2.4.1 |
Kingdom | Bacteria |
Replicon accession | NC_007488 |
Strand | - |
Start bp | 73814 |
End bp | 75046 |
Gene Length | 1233 bp |
Protein Length | 410 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 640069360 |
Product | ring hydroxylating dioxygenase, alpha subunit |
Protein accession | YP_345227 |
Protein GI | 77404653 |
COG category | [P] Inorganic ion transport and metabolism [R] General function prediction only |
COG ID | [COG4638] Phenylpropionate dioxygenase and related ring-hydroxylating dioxygenases, large terminal subunit |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.229993 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCCCATC CGTCAGATCT GCTCCCCCTC CTTCACAGCC AGCGGTCGGG CTTCTCGCTC GCCCGGCCCT TCTATGCCGA CGCCTCGGTG CATCAGGCCG ATCTCGAGAC GATCTGGTAT CGCAGCTGGA TCTTCGCGGC CTCGGCGGCC GAACTGCCGC GCGCGGGCAG CTATGTCACG CTGCAGCTCG GGCGCTATCC GCTGGTGATC GTGCGGGGAT CGGACGGGGC GGTGCGGGCC TTCCACAATT CCTGCCGCCA CCGCGGCAGC CGCATCTGCT CGAAACCCTC GGGCCAGGCG GCGAAGCTGG TCTGCCCCTA TCATCAATGG ACCTACGAGA CGGACGGGCG GCTGCTCTGG GCCCGCGACA TGGGCCCGGA ATTCGAGCCC GCCCGCCACG GGCTGAAGCC CGTCGCCTGC GAGATCGCCG CGGGCATGGT CTTCCTCTGC CTCGCCGCGG ATCCGCCCGA TTTCTCGGAG GTGAAGGCCG CCGCCGACCG CTATGCCGCG CCGCACCGGC TTGACGAGCT GAAGGTCGCG CACCGCTCCT CGATCCTCGA GAAGGCGAAC TGGAAGCTGG TGATGGAGAA CAACCGCGAG TGCTATCACT GCGCCGGGTC GCATCCCGCG CTCTGCCGCA CCTTCAACGA CGATCCCGAC CTCGTGGGAT CGGACGACAG CCTGTCCTCG CCCGCGGGCG CCGCCCATGT GGCACGCTGC GAGGCGGCGG GGTTGCCCTC GCGCTATCTG ATCGGCGGCG ACGCGCAATG GCGGCTGGTG CGGATCCCCT TCGTGGGCGA GGCGGTGAGC TACACGATGG ACGGCAGGGC CGCCGCGCCG CGGATCCCCG GCGTTCCCTT CGACAATGCG GGCTCTCTGC TCTTCTTCCA TTATCCCAAC ACCTGGAACC ACTTCCTCTC GGACCATGTG CTGAACTTCC GCATGCTGCC GGTCAGCCCG ACCGAGACGG AGGTCACCAC GACCTGGCTC GTCCACAAGG ACGCGGTCGA GGGGCGCGAC TACGATCTCG CCCGGCTGAC CGAAGTCTGG ACCGCCACCA ACGACGAGGA CCGTCGCGTG GTCGAGGAGA ACCAGATCGG CGTCTCCTCG CCCGCCTACG AGCCCGGCCC CTATTCCGTC CGGCAGGAGA GCGGCGTGAT CCAGTTCGTC GACTGGTATG TGCGCACCAT GACGGCGGGC CTCGCCGGTC CCTCCGCCAT GGCCGCGGAA TAG
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Protein sequence | MAHPSDLLPL LHSQRSGFSL ARPFYADASV HQADLETIWY RSWIFAASAA ELPRAGSYVT LQLGRYPLVI VRGSDGAVRA FHNSCRHRGS RICSKPSGQA AKLVCPYHQW TYETDGRLLW ARDMGPEFEP ARHGLKPVAC EIAAGMVFLC LAADPPDFSE VKAAADRYAA PHRLDELKVA HRSSILEKAN WKLVMENNRE CYHCAGSHPA LCRTFNDDPD LVGSDDSLSS PAGAAHVARC EAAGLPSRYL IGGDAQWRLV RIPFVGEAVS YTMDGRAAAP RIPGVPFDNA GSLLFFHYPN TWNHFLSDHV LNFRMLPVSP TETEVTTTWL VHKDAVEGRD YDLARLTEVW TATNDEDRRV VEENQIGVSS PAYEPGPYSV RQESGVIQFV DWYVRTMTAG LAGPSAMAAE
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