Gene RSP_3978 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRSP_3978 
Symbol 
ID3711819 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides 2.4.1 
KingdomBacteria 
Replicon accessionNC_007488 
Strand
Start bp73814 
End bp75046 
Gene Length1233 bp 
Protein Length410 aa 
Translation table11 
GC content69% 
IMG OID640069360 
Productring hydroxylating dioxygenase, alpha subunit 
Protein accessionYP_345227 
Protein GI77404653 
COG category[P] Inorganic ion transport and metabolism
[R] General function prediction only 
COG ID[COG4638] Phenylpropionate dioxygenase and related ring-hydroxylating dioxygenases, large terminal subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.229993 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCCCATC CGTCAGATCT GCTCCCCCTC CTTCACAGCC AGCGGTCGGG CTTCTCGCTC 
GCCCGGCCCT TCTATGCCGA CGCCTCGGTG CATCAGGCCG ATCTCGAGAC GATCTGGTAT
CGCAGCTGGA TCTTCGCGGC CTCGGCGGCC GAACTGCCGC GCGCGGGCAG CTATGTCACG
CTGCAGCTCG GGCGCTATCC GCTGGTGATC GTGCGGGGAT CGGACGGGGC GGTGCGGGCC
TTCCACAATT CCTGCCGCCA CCGCGGCAGC CGCATCTGCT CGAAACCCTC GGGCCAGGCG
GCGAAGCTGG TCTGCCCCTA TCATCAATGG ACCTACGAGA CGGACGGGCG GCTGCTCTGG
GCCCGCGACA TGGGCCCGGA ATTCGAGCCC GCCCGCCACG GGCTGAAGCC CGTCGCCTGC
GAGATCGCCG CGGGCATGGT CTTCCTCTGC CTCGCCGCGG ATCCGCCCGA TTTCTCGGAG
GTGAAGGCCG CCGCCGACCG CTATGCCGCG CCGCACCGGC TTGACGAGCT GAAGGTCGCG
CACCGCTCCT CGATCCTCGA GAAGGCGAAC TGGAAGCTGG TGATGGAGAA CAACCGCGAG
TGCTATCACT GCGCCGGGTC GCATCCCGCG CTCTGCCGCA CCTTCAACGA CGATCCCGAC
CTCGTGGGAT CGGACGACAG CCTGTCCTCG CCCGCGGGCG CCGCCCATGT GGCACGCTGC
GAGGCGGCGG GGTTGCCCTC GCGCTATCTG ATCGGCGGCG ACGCGCAATG GCGGCTGGTG
CGGATCCCCT TCGTGGGCGA GGCGGTGAGC TACACGATGG ACGGCAGGGC CGCCGCGCCG
CGGATCCCCG GCGTTCCCTT CGACAATGCG GGCTCTCTGC TCTTCTTCCA TTATCCCAAC
ACCTGGAACC ACTTCCTCTC GGACCATGTG CTGAACTTCC GCATGCTGCC GGTCAGCCCG
ACCGAGACGG AGGTCACCAC GACCTGGCTC GTCCACAAGG ACGCGGTCGA GGGGCGCGAC
TACGATCTCG CCCGGCTGAC CGAAGTCTGG ACCGCCACCA ACGACGAGGA CCGTCGCGTG
GTCGAGGAGA ACCAGATCGG CGTCTCCTCG CCCGCCTACG AGCCCGGCCC CTATTCCGTC
CGGCAGGAGA GCGGCGTGAT CCAGTTCGTC GACTGGTATG TGCGCACCAT GACGGCGGGC
CTCGCCGGTC CCTCCGCCAT GGCCGCGGAA TAG
 
Protein sequence
MAHPSDLLPL LHSQRSGFSL ARPFYADASV HQADLETIWY RSWIFAASAA ELPRAGSYVT 
LQLGRYPLVI VRGSDGAVRA FHNSCRHRGS RICSKPSGQA AKLVCPYHQW TYETDGRLLW
ARDMGPEFEP ARHGLKPVAC EIAAGMVFLC LAADPPDFSE VKAAADRYAA PHRLDELKVA
HRSSILEKAN WKLVMENNRE CYHCAGSHPA LCRTFNDDPD LVGSDDSLSS PAGAAHVARC
EAAGLPSRYL IGGDAQWRLV RIPFVGEAVS YTMDGRAAAP RIPGVPFDNA GSLLFFHYPN
TWNHFLSDHV LNFRMLPVSP TETEVTTTWL VHKDAVEGRD YDLARLTEVW TATNDEDRRV
VEENQIGVSS PAYEPGPYSV RQESGVIQFV DWYVRTMTAG LAGPSAMAAE