Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSP_3974 |
Symbol | |
ID | 3711824 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodobacter sphaeroides 2.4.1 |
Kingdom | Bacteria |
Replicon accession | NC_007488 |
Strand | + |
Start bp | 79001 |
End bp | 81367 |
Gene Length | 2367 bp |
Protein Length | 788 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 640069365 |
Product | transketolase |
Protein accession | YP_345232 |
Protein GI | 77404658 |
COG category | [C] Energy production and conversion |
COG ID | [COG2609] Pyruvate dehydrogenase complex, dehydrogenase (E1) component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.235821 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCAGGCTG AGTTGAAGGC GATCGAGCAG CGGCTCTTGT GGCTGTCGCA CTGGATGATC CACCATGCGA ACCACATCCG GCCGAAGGTC GACGGGATCA AGGTGGGCGG CCATCAGGCC TCGTCCGCCT CGATGGTCTC GATCCTGACC GCGCTCTATT TCTCGGCCCT GCGCCCCGAG GACCGGGTGG CGGTCAAGCC GCATGCCGGG CCACTCTTCC ATGCCATGCA GTATCTGATG GGCAATCTCG ACCGCGCGAA GATGGAGAAT TTCCGCGGCT ACGGCGGGGT GCAATCCTAT CCGAGCCGCA CCAAGGACAC GGACGACGTG GATTTCTCGA CCGGCTCGGT CGGTCTCGGG GTGGCCATCA CCGCCTTCGC CTCGCTGATC CAGGATTATG TCCGCGCGAA GCCCTGGGGC GCCGATGTGG CGCCGGGGCG GATGATCGCG CTGATGGGCG ACGCCGAGCT CGACGAGGGC AACATCCACG AATGCCTGCA GGAGGGCTGG AAACACGGGC TGCGCAACTG CTGGTGGATC GTCGATTACA ACCGCCAGTC GCTCGACGGG GTGGTGCAGG AAGGGCTCTG GAGCCGGATC GAGGGTCTCT TCACCGCCTT CGGCTGGGAG GTGGTGCGGC TCAAGCACGG CGTCCTGCAG CGCGCGGCCT TCGCCGAGCC GGGGGGCGAG CGGCTGCGCG CCTGGATCGA CAGCTGCCCG AACGACCTTT ATTCCGCGCT GACCTACGAG GGCGGTGCAG TCTGGCGCGC GCAGCTGATG GAGGATCTGG GCGATCAGGG CGAGGTCAAT GCGCTGATCG GCCGCCGCAG CGACGAAGAG CTGGCGCTGC TGATGGAGAA CCTCGGCGGC AATTGCGTGG ACACGATGGC CGAGGCCTTC GCCGCAGTGG ATCACGACCG GCCGACCTGC TTTCTCGCCT ATACGGTCAA GGGCTGGGGC ACGCCCATCG CCGGGCACAA GGACAACCAC GGCGGGCTGA TGACCAAGGC GCAGATGGCC GACTGGCAGC GCCGCATGGG GGTGCCCGAG GGGCAGGAAT GGGAGCCCTT CGCAGGCGTG GCGGACCCCG AGGCGCTGCG GCGCTTCCTG CGCTCGGTGC CCTTCTTCGC GGCGGGCCCG CGGCGGATGA CCGACGCGCC GCTCGCCGTG CCGCCGATCG CGCTCACCTC CGAGCGCGAG ATCTCGACCC AGGCGGCCTT CGGCAAGATC CTCGACGAGC TCGCCCGCGG CGACAGCCCG CTGGCCGCGC GGATCGTCAC CACCTCGCCC GATGTCACCG GCACCACGGG CCTCGGCCCC TGGGTGAACC GCCGCGGCCT CTTCGCCCGC GCCGCCCGCG CCGACCGGTT CCGCGAGCGG CGCATCGCCT CGACCGCGAA ATGGGATGCC GGGCCCGAGG GCCAGCATAT CGAGCTCGGC ATCGCCGAGA TGAACCTCTT CCTGACGCTC GGCGCGGCGG GCCTTTCGCA TGCGCTCTTC GGGCGGCGGC TCATTCCGGT GGGCACGGTC TACGATCCGT TCGTCTGCCG CGGCCTCGAT GCGCTGAACT ATGCCTGCTA TCAGGATGCG CGTTTCCTGA TCGCGGGCAC GCCCTCGGGC GTGACGCTGG CCCCCGAGGG CGGCGCGCAC CAGTCGATCT CGACGCCGCT GATCGGCATG GCGCAGGACG GGCTCGCGGC CTTCGAGCCC GCCTTCGTGG ACGAGCTTTC CGTCATCATG GAATGGGCCT TCGATTATCT CCAGCGCGAC GGCCACGAGG GGCGCGATCC CCGCACATGG CTCCGGGACG CGACCGGCGG CTCGGTCTAT CTGCGGCTGA CGACGAACCC GCTCGAGCAG CCGGGGCGGC GGCACGACGA TGCCTTCCGG CAGGGCGCGG TGGATGGCGG CTACTGGCTG CGCCCGCCGG GCAGCAACTG CGAGGTGGTG ATCGCCTATC AGGGGGCGGT CGCGCCCGAG GCGATCCGCG CCGCGGGCCA GATGGCCGAG GCGCGCCGCG ACGTGGGCGT GCTGGCCGTG ACTTCGGCCG ACCGGCTGAA CGCGGGCTGG ACCGCGGCGC AGCGGGCGCG CGCTCTGGGC GAGACCGGCG CCAGCGCCCT CGTCGAGCGG CTGCTGGCCG ACGTGCCGCG CGACTGCCTG ATCGTGACCG TGATCGACGG CCATCCCGCG ACGCTGGCCT GGCTCGGCGG GGTGCGCGGG CACCGCACGC TCTCGCTCGG GGTCGAGCAT TTCGGCCAGA CCGGCACCAT CGGCGATCTC TACCGCCATT TCGGCATCGA CGCCCGCAGC ATCGTCGAGC GGGTCTCGGG GCTGACGGAG GGCCGCCGGA TCCCCGCGCG GGCCTGA
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Protein sequence | MQAELKAIEQ RLLWLSHWMI HHANHIRPKV DGIKVGGHQA SSASMVSILT ALYFSALRPE DRVAVKPHAG PLFHAMQYLM GNLDRAKMEN FRGYGGVQSY PSRTKDTDDV DFSTGSVGLG VAITAFASLI QDYVRAKPWG ADVAPGRMIA LMGDAELDEG NIHECLQEGW KHGLRNCWWI VDYNRQSLDG VVQEGLWSRI EGLFTAFGWE VVRLKHGVLQ RAAFAEPGGE RLRAWIDSCP NDLYSALTYE GGAVWRAQLM EDLGDQGEVN ALIGRRSDEE LALLMENLGG NCVDTMAEAF AAVDHDRPTC FLAYTVKGWG TPIAGHKDNH GGLMTKAQMA DWQRRMGVPE GQEWEPFAGV ADPEALRRFL RSVPFFAAGP RRMTDAPLAV PPIALTSERE ISTQAAFGKI LDELARGDSP LAARIVTTSP DVTGTTGLGP WVNRRGLFAR AARADRFRER RIASTAKWDA GPEGQHIELG IAEMNLFLTL GAAGLSHALF GRRLIPVGTV YDPFVCRGLD ALNYACYQDA RFLIAGTPSG VTLAPEGGAH QSISTPLIGM AQDGLAAFEP AFVDELSVIM EWAFDYLQRD GHEGRDPRTW LRDATGGSVY LRLTTNPLEQ PGRRHDDAFR QGAVDGGYWL RPPGSNCEVV IAYQGAVAPE AIRAAGQMAE ARRDVGVLAV TSADRLNAGW TAAQRARALG ETGASALVER LLADVPRDCL IVTVIDGHPA TLAWLGGVRG HRTLSLGVEH FGQTGTIGDL YRHFGIDARS IVERVSGLTE GRRIPARA
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