Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSP_3970 |
Symbol | |
ID | 3712014 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodobacter sphaeroides 2.4.1 |
Kingdom | Bacteria |
Replicon accession | NC_007488 |
Strand | + |
Start bp | 83574 |
End bp | 84509 |
Gene Length | 936 bp |
Protein Length | 311 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 640069369 |
Product | 3-hydroxyacyl-CoA dehydrogenase |
Protein accession | YP_345236 |
Protein GI | 77404662 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1250] 3-hydroxyacyl-CoA dehydrogenase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCGGTGG GAGTGATTGG AACCGGCTTC GTCGGCCGGG GCTGGGCGAT CTGCCTTGCC CGGGCCGGCC ACGAGGTCCG GCTGTGGGAT CCGGCGCCCG ACGCCGCCGA GGCCGCCCGC ACCTATATCG CCGAGATGCT GCCGGATCTG GCGGCCGCGG ACCTGCTGGG CGGCCGCGCC CCGGACGCGG TGCTGGAGCG GATCCGCGTC GCCCCGGACA TGGCCACCGC CGTCCGCGGC GCCCGCCACA TTCAGGAAAG CGCCCCCGAG GATCTGCTTC TGAAGACCGC GCTCTTCGCC GAGCTCGACG CTCTGGCCGA TCCCGGCGCG GTGATCGCAA GCTCCTCCTC GGCGCTTCTG CCTTCGGCCT TCACCGAGGG GCTGGCAGGG GCGGGCCGCT GCCTCGTCGC CCATCCGGTC AATCCGCCGC ACCTCATTCC GCTGGTCGAG CTGGTGCCGG CGCCGTGGAC CGACGAGGAG ACGCTGGCCC GGACCGAGAC GCTCATGCGC GAGATCGGCC AGAGCCCGGT GCGGCTCGAG CGCGAGGTGG ACGGCTTCCT GCTGAACCGG ATCCAGGCCG CGGTGCTCGA CGAGGCCTTC CGGCTGGTCG ATGCGGGCCT CGCCTCGGCC GATGCGGTGG ATGCCTGCCT CCGCGACGGT CTGGCGCTGC GCTGGGTCTT CATGGGGCCG TTCGAGACCA TCGACCTCAA CGCGCCCGAG GGCGTGCGCG ACTATGTCGC CCGCTACCAG CCGATGTTCC GCAGGCTCAC CGACACGATG CGGGAAAGCG CCGACTGGTC CGGCCCGGTG CTCGACCGGA TCGAGGCCGA CCGCCGCGCG CGCCTGCCGC AGGAGGCGCT GCGCGCCCGG CAGATGTGGC GCGACCGCCG GCTGATGGCG CTCGCCGCCT TCCGCCGCCA ATCCCTGCAA TCCTAG
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Protein sequence | MSVGVIGTGF VGRGWAICLA RAGHEVRLWD PAPDAAEAAR TYIAEMLPDL AAADLLGGRA PDAVLERIRV APDMATAVRG ARHIQESAPE DLLLKTALFA ELDALADPGA VIASSSSALL PSAFTEGLAG AGRCLVAHPV NPPHLIPLVE LVPAPWTDEE TLARTETLMR EIGQSPVRLE REVDGFLLNR IQAAVLDEAF RLVDAGLASA DAVDACLRDG LALRWVFMGP FETIDLNAPE GVRDYVARYQ PMFRRLTDTM RESADWSGPV LDRIEADRRA RLPQEALRAR QMWRDRRLMA LAAFRRQSLQ S
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