Gene RSP_3970 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRSP_3970 
Symbol 
ID3712014 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides 2.4.1 
KingdomBacteria 
Replicon accessionNC_007488 
Strand
Start bp83574 
End bp84509 
Gene Length936 bp 
Protein Length311 aa 
Translation table11 
GC content73% 
IMG OID640069369 
Product3-hydroxyacyl-CoA dehydrogenase 
Protein accessionYP_345236 
Protein GI77404662 
COG category[I] Lipid transport and metabolism 
COG ID[COG1250] 3-hydroxyacyl-CoA dehydrogenase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCGGTGG GAGTGATTGG AACCGGCTTC GTCGGCCGGG GCTGGGCGAT CTGCCTTGCC 
CGGGCCGGCC ACGAGGTCCG GCTGTGGGAT CCGGCGCCCG ACGCCGCCGA GGCCGCCCGC
ACCTATATCG CCGAGATGCT GCCGGATCTG GCGGCCGCGG ACCTGCTGGG CGGCCGCGCC
CCGGACGCGG TGCTGGAGCG GATCCGCGTC GCCCCGGACA TGGCCACCGC CGTCCGCGGC
GCCCGCCACA TTCAGGAAAG CGCCCCCGAG GATCTGCTTC TGAAGACCGC GCTCTTCGCC
GAGCTCGACG CTCTGGCCGA TCCCGGCGCG GTGATCGCAA GCTCCTCCTC GGCGCTTCTG
CCTTCGGCCT TCACCGAGGG GCTGGCAGGG GCGGGCCGCT GCCTCGTCGC CCATCCGGTC
AATCCGCCGC ACCTCATTCC GCTGGTCGAG CTGGTGCCGG CGCCGTGGAC CGACGAGGAG
ACGCTGGCCC GGACCGAGAC GCTCATGCGC GAGATCGGCC AGAGCCCGGT GCGGCTCGAG
CGCGAGGTGG ACGGCTTCCT GCTGAACCGG ATCCAGGCCG CGGTGCTCGA CGAGGCCTTC
CGGCTGGTCG ATGCGGGCCT CGCCTCGGCC GATGCGGTGG ATGCCTGCCT CCGCGACGGT
CTGGCGCTGC GCTGGGTCTT CATGGGGCCG TTCGAGACCA TCGACCTCAA CGCGCCCGAG
GGCGTGCGCG ACTATGTCGC CCGCTACCAG CCGATGTTCC GCAGGCTCAC CGACACGATG
CGGGAAAGCG CCGACTGGTC CGGCCCGGTG CTCGACCGGA TCGAGGCCGA CCGCCGCGCG
CGCCTGCCGC AGGAGGCGCT GCGCGCCCGG CAGATGTGGC GCGACCGCCG GCTGATGGCG
CTCGCCGCCT TCCGCCGCCA ATCCCTGCAA TCCTAG
 
Protein sequence
MSVGVIGTGF VGRGWAICLA RAGHEVRLWD PAPDAAEAAR TYIAEMLPDL AAADLLGGRA 
PDAVLERIRV APDMATAVRG ARHIQESAPE DLLLKTALFA ELDALADPGA VIASSSSALL
PSAFTEGLAG AGRCLVAHPV NPPHLIPLVE LVPAPWTDEE TLARTETLMR EIGQSPVRLE
REVDGFLLNR IQAAVLDEAF RLVDAGLASA DAVDACLRDG LALRWVFMGP FETIDLNAPE
GVRDYVARYQ PMFRRLTDTM RESADWSGPV LDRIEADRRA RLPQEALRAR QMWRDRRLMA
LAAFRRQSLQ S