Gene RSP_3966 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRSP_3966 
Symbol 
ID3712018 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides 2.4.1 
KingdomBacteria 
Replicon accessionNC_007488 
Strand
Start bp87645 
End bp88658 
Gene Length1014 bp 
Protein Length337 aa 
Translation table11 
GC content69% 
IMG OID640069373 
ProductABC branched chain amino acid transporter, inner membrane subunit 
Protein accessionYP_345240 
Protein GI77404666 
COG category[E] Amino acid transport and metabolism 
COG ID[COG4177] ABC-type branched-chain amino acid transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCTGAAG CCTCCCTCGC CTCGGCAGAG GGCCGGCGGA GCGGCACCGA GACGCGTCTC 
GGGCTCCTGT GCCTGGCCGT GCTGGTGGTC CTGCTGTTTC TCGCGCCGGG CCTCGTGAAC
CCGGGCATCC TCTTCGTCAT CGGCATGACG CTGATCCAGG CGGTCTTCGC TTTGTCCTGG
AACCTGCTCT TCGGCTTCAC CGGGCTTGCG AGCTTCGGCC ATGCCGGCTT CTTCGCCATC
GGCGCCTATT TCACCGGGGC GGCGCTGCGC TACGATTTCC ACCTGCCGTT CCTCGCCGTG
CTGGCGGTGG CGGGCCTTCT CGGCGCGCTG GTGGCGCTGG CCATCGGGGT CGTGGCGCTG
AAGCGGCTGA CGGGGATCTT CCTCGCGGTT CTGACCGTGG CGCTGACCGA GGCCATGGCC
AAGATCATCG GCTTCTCGCC CGCGCTCGGA GAGCAGGACG GGCTGGGCAA CATCCCCCGC
CCGGTGATCG AGATGGGCCT GTTCCAGATC GACCTCACCC ACGGCGACGA CTATTACCGC
TTCCTCGTCG TGGCCACCGT CCTCATCGTG GCGGCGCTCT GGTGGGTGGT CCATTCGCGC
CTCGGCCGCA CCTTCCGCGC GATCCGCGAG GATGCCGACC GCGCCCGCTT CGTGGGCATC
GACGTGGCGC GCTACCGGGT GATCTCCTTC ATGATCTCGG GCGGCACCGC GGCGCTCGCG
GGCGCGCTCT CGGCGCCGCT GACCCGGATC GTGACGCTCG ATCAGGTGAA CTGGCTCGCC
TCGACCCAGC CGATCCTGAA CTCGCTTCTG GGCGGCTTCA CCTCGTTCTG GGGGCCGATC
GTGGGCTCGG CGGCCTTCAG CACGATCAAC TACTTCACCC GCGGCTTCCC GGGCCTGTCC
GAGATCATGG TGGGCGGCAT CCTCGTCGTC GTGATCCTCG TGGCGCCCAC GGGCATCCTC
GGGCTTCTGG GCAAGCTGCG CCGGAGCGCG CTCGGCAAAG GAGGCCGCAA ATGA
 
Protein sequence
MSEASLASAE GRRSGTETRL GLLCLAVLVV LLFLAPGLVN PGILFVIGMT LIQAVFALSW 
NLLFGFTGLA SFGHAGFFAI GAYFTGAALR YDFHLPFLAV LAVAGLLGAL VALAIGVVAL
KRLTGIFLAV LTVALTEAMA KIIGFSPALG EQDGLGNIPR PVIEMGLFQI DLTHGDDYYR
FLVVATVLIV AALWWVVHSR LGRTFRAIRE DADRARFVGI DVARYRVISF MISGGTAALA
GALSAPLTRI VTLDQVNWLA STQPILNSLL GGFTSFWGPI VGSAAFSTIN YFTRGFPGLS
EIMVGGILVV VILVAPTGIL GLLGKLRRSA LGKGGRK