Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSP_3962 |
Symbol | pcaD |
ID | 3712022 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodobacter sphaeroides 2.4.1 |
Kingdom | Bacteria |
Replicon accession | NC_007488 |
Strand | + |
Start bp | 90920 |
End bp | 91720 |
Gene Length | 801 bp |
Protein Length | 266 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 640069377 |
Product | 3-oxoadipate enol-lactonase |
Protein accession | YP_345244 |
Protein GI | 77404670 |
COG category | [R] General function prediction only |
COG ID | [COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) |
TIGRFAM ID | [TIGR02427] 3-oxoadipate enol-lactonase |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.535477 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCTGCACA ATACCGGAAG CCACTGGATC TATTACGACC TGATCGGCGC GCCCGACGCG CCGGTCGTCT GCATGAGCCA CTCGCTGACC TCGGACCACG GCATGTGGGC CGAGCAGGTG CCCGCCTTGC TCGAGGCCGG GTTCCAGGTG CTCAGGATCG ACACCCGCGG CCACGGCGGC AGCAGCGCCC CGCCCGGCGA CTACCGGATC GAGGAACTGG CCGGCGACGT GCTCTCGGTG CTCGACGCGC TCGGGTTCGA GAGCGGCGTC CACATGATCG GCCTGTCGAT GGGCGGCATG ATCGGGCAGG TGATCGCGGC CGACCATCCC GGCCGGCTCG CCTCGCTCAT GGTCTGCTGC TCGGCCTCGA AATGGATGGG CGACACCGAG CTGATGAAGG GGCGCATCCG CGCGGTGAAG GAGTCCGGCA CGCTCGAGAG CATCGTCGCG GCCAACATGG AACGCCGCTA CGGCCCGGGC TTCCGCGAGC GGCGCCCGCT CCGGTGGGAG GCGCTGCGCC AGACCTTCCT CGGCACCAAG CTCGACGGCT ATTTCGGCTG CATGAACGCC TGCCTCACCC ACAATGTCGA GCCGCGCCTC GGGCAGATCG ACATTCCGGT GCTGGTGGTG GCGGGCTCCG AGGATCCGAC CACGCCGCCG GCCGACAACC GGCTGATCGC CTCCTGCATC CCCGGCGCGC GCTACGCGGA GATCGCGGGC GGCTATCACT TCCCGAACGT CGAATTCGAC GGCGAATTCA ACCGGATCAT GCTGGACTGG CTGAAGGAAC GGCGCGGCTG A
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Protein sequence | MLHNTGSHWI YYDLIGAPDA PVVCMSHSLT SDHGMWAEQV PALLEAGFQV LRIDTRGHGG SSAPPGDYRI EELAGDVLSV LDALGFESGV HMIGLSMGGM IGQVIAADHP GRLASLMVCC SASKWMGDTE LMKGRIRAVK ESGTLESIVA ANMERRYGPG FRERRPLRWE ALRQTFLGTK LDGYFGCMNA CLTHNVEPRL GQIDIPVLVV AGSEDPTTPP ADNRLIASCI PGARYAEIAG GYHFPNVEFD GEFNRIMLDW LKERRG
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