Gene RSP_3962 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRSP_3962 
SymbolpcaD 
ID3712022 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides 2.4.1 
KingdomBacteria 
Replicon accessionNC_007488 
Strand
Start bp90920 
End bp91720 
Gene Length801 bp 
Protein Length266 aa 
Translation table11 
GC content69% 
IMG OID640069377 
Product3-oxoadipate enol-lactonase 
Protein accessionYP_345244 
Protein GI77404670 
COG category[R] General function prediction only 
COG ID[COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)  
TIGRFAM ID[TIGR02427] 3-oxoadipate enol-lactonase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.535477 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTGCACA ATACCGGAAG CCACTGGATC TATTACGACC TGATCGGCGC GCCCGACGCG 
CCGGTCGTCT GCATGAGCCA CTCGCTGACC TCGGACCACG GCATGTGGGC CGAGCAGGTG
CCCGCCTTGC TCGAGGCCGG GTTCCAGGTG CTCAGGATCG ACACCCGCGG CCACGGCGGC
AGCAGCGCCC CGCCCGGCGA CTACCGGATC GAGGAACTGG CCGGCGACGT GCTCTCGGTG
CTCGACGCGC TCGGGTTCGA GAGCGGCGTC CACATGATCG GCCTGTCGAT GGGCGGCATG
ATCGGGCAGG TGATCGCGGC CGACCATCCC GGCCGGCTCG CCTCGCTCAT GGTCTGCTGC
TCGGCCTCGA AATGGATGGG CGACACCGAG CTGATGAAGG GGCGCATCCG CGCGGTGAAG
GAGTCCGGCA CGCTCGAGAG CATCGTCGCG GCCAACATGG AACGCCGCTA CGGCCCGGGC
TTCCGCGAGC GGCGCCCGCT CCGGTGGGAG GCGCTGCGCC AGACCTTCCT CGGCACCAAG
CTCGACGGCT ATTTCGGCTG CATGAACGCC TGCCTCACCC ACAATGTCGA GCCGCGCCTC
GGGCAGATCG ACATTCCGGT GCTGGTGGTG GCGGGCTCCG AGGATCCGAC CACGCCGCCG
GCCGACAACC GGCTGATCGC CTCCTGCATC CCCGGCGCGC GCTACGCGGA GATCGCGGGC
GGCTATCACT TCCCGAACGT CGAATTCGAC GGCGAATTCA ACCGGATCAT GCTGGACTGG
CTGAAGGAAC GGCGCGGCTG A
 
Protein sequence
MLHNTGSHWI YYDLIGAPDA PVVCMSHSLT SDHGMWAEQV PALLEAGFQV LRIDTRGHGG 
SSAPPGDYRI EELAGDVLSV LDALGFESGV HMIGLSMGGM IGQVIAADHP GRLASLMVCC
SASKWMGDTE LMKGRIRAVK ESGTLESIVA ANMERRYGPG FRERRPLRWE ALRQTFLGTK
LDGYFGCMNA CLTHNVEPRL GQIDIPVLVV AGSEDPTTPP ADNRLIASCI PGARYAEIAG
GYHFPNVEFD GEFNRIMLDW LKERRG