Gene RSP_3952 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRSP_3952 
SymbolgtpC 
ID3712051 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides 2.4.1 
KingdomBacteria 
Replicon accessionNC_007488 
Strand
Start bp99890 
End bp100558 
Gene Length669 bp 
Protein Length222 aa 
Translation table11 
GC content68% 
IMG OID640069386 
ProductABC amino acid transporter, inner membrane subunit 
Protein accessionYP_345253 
Protein GI77404679 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0765] ABC-type amino acid transport system, permease component 
TIGRFAM ID[TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCGTCA TCGACTGGGG CTATATCCTC GCGGCCTTCC CCGACCTCAT GCGCGGCCTC 
GGCATGACCC TCATGGTCAG CCTGCTCGCG ATCCTCTTCT CGCTCCTTCT GGGGCTGGCC
GGCTGCGCGC TGCGCGTCTC GGGCATCCGC CCGCTCTCCT ATGCCGTGCG CGGCTATGTC
GAGTTCATCC GCGGCACGCC CTATCTCGTG CAGATCTTCT TCGTCTTCTA CGGCCTGCCG
AGCCTCGGGC TCACGCTCTC GATCTTCTGG TCGGGGGTGC TCGCCCTCAC GATCTGGGCC
AGCGCCTTCC ATATCGAGAG CTTCCGCGCA GGTCTGGCCT CGGTCGGGCG CGAGATGCAC
GACGCCTCGG CCTCGCTGGG CCTGCGCCGG CTGCCGCACG CGCTCCTCGT GGTGGCGCCC
ATCGCGCTGC GGTCGGCCCT GCCCTCCACG CTGAACACGG TGGTCGGCAC GATCAAGAAC
TCGGCCTATC TGCAGGCCAT CGGCCTCGTG GAGCTGACCT TCGTCGCGGT CGACCGGATC
GCGCAGGACT TCCGCTCGAC CGAGATGTTC CTCTCGATCT GCGTCATCTA CCTCGTCGTC
ATCCTCGGCG TCTCGGCGCT GGGGCACCGG CTGGAACGGC GCCTCAACCG GCCCTACGGG
TCACGGTGA
 
Protein sequence
MTVIDWGYIL AAFPDLMRGL GMTLMVSLLA ILFSLLLGLA GCALRVSGIR PLSYAVRGYV 
EFIRGTPYLV QIFFVFYGLP SLGLTLSIFW SGVLALTIWA SAFHIESFRA GLASVGREMH
DASASLGLRR LPHALLVVAP IALRSALPST LNTVVGTIKN SAYLQAIGLV ELTFVAVDRI
AQDFRSTEMF LSICVIYLVV ILGVSALGHR LERRLNRPYG SR