Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSP_3951 |
Symbol | gtpB |
ID | 3712052 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodobacter sphaeroides 2.4.1 |
Kingdom | Bacteria |
Replicon accession | NC_007488 |
Strand | - |
Start bp | 100619 |
End bp | 101461 |
Gene Length | 843 bp |
Protein Length | 280 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 640069387 |
Product | ABC amino acid transporter, periplasmic ligand binding protein |
Protein accession | YP_345254 |
Protein GI | 77404680 |
COG category | [E] Amino acid transport and metabolism [T] Signal transduction mechanisms |
COG ID | [COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCCAAGA TCGGCACCCG CCTCGCCTCC CTCCTTCTGT CGGGGGCGCT CGTGCTCTCG GCCGCCTCCG CCGCCGTGGC GCAGGACATG CCGCCCCTGC CCGAGGCGAT CCAGAAGGCG GGCAAGATCC GCATCGGCGT GAAATGCGAC AGCCCGCCCT TCGGCGCCTC CGGCCCCGAC GGCAAGCCGC GCGGCATCGA GGTCGAGATG GCCAGGAAGA TCGGCGACTA TGCCTTCGGC TCGGAGGAGG GCGCGGAGCT TTCCTGCGTC ACCAGCGAGG CGCGCATCTC GTCGCTGAAT GCCGGCAAGC TCGATCTGAT CATCGCCACG CTGGGCCGGA CGGCCGCGCG GCAGGAGGTG ATCGACTATT CCAACATCTA TTTCTGGGGC ACCTCGAACG TGCTGGTGCC GGCCGACAGC CCGGTGCAGA AGCTCTCGGA CCTTCAGGGC CGCTCGGTGC TGGTGGTCAA GGGCGCCACG CAGATCAAGT GGCTCGAAGC CAACATCCCC GACATCTCGA TCGTGCAGCT CAACACCACC GCCGACGGGG TGCAGGCGCT GATGCAGGGC CGGGCCGACG GGTTCGTGGG CGACGGCGGG CTGATCTACA CGCTCGGCGG CAACTATCCC AAGCTCCGCG TGATCGAGGA AGGGCTCGAC CTCGGCGTGA ACGGCGTGGG GATGCGCAAG GGCGAGACCG AGCTTCAGAC CTTCGTCAAC GCGGTGCTCG ACGAGCTGCG CAAGGGCGAT TTCTACGAGA CGGTGATCCC GCAGTTCGTC GAGGAACCGG CCGTGGTCGA TGTGATGAAG CGCGGCTTCC TCGAAGAGCC GCCGCAGATC TGA
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Protein sequence | MPKIGTRLAS LLLSGALVLS AASAAVAQDM PPLPEAIQKA GKIRIGVKCD SPPFGASGPD GKPRGIEVEM ARKIGDYAFG SEEGAELSCV TSEARISSLN AGKLDLIIAT LGRTAARQEV IDYSNIYFWG TSNVLVPADS PVQKLSDLQG RSVLVVKGAT QIKWLEANIP DISIVQLNTT ADGVQALMQG RADGFVGDGG LIYTLGGNYP KLRVIEEGLD LGVNGVGMRK GETELQTFVN AVLDELRKGD FYETVIPQFV EEPAVVDVMK RGFLEEPPQI
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