| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noc_3087 |
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| Symbol | |
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| ID | 3705665 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrosococcus oceani ATCC 19707 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007484 |
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| Strand | - |
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| Start bp | 3479245 |
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| End bp | 3480882 |
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| Gene Length | 1638 bp |
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| Protein Length | 545 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 637739561 |
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| Product | 60 kDa inner membrane insertion protein |
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| Protein accession | YP_345058 |
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| Protein GI | 77166533 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0706] Preprotein translocase subunit YidC |
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| TIGRFAM ID | [TIGR03592] membrane protein insertase, YidC/Oxa1 family, C-terminal domain
[TIGR03593] membrane protein insertase, YidC/Oxa1 family, N-terminal domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.863197 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAAAACT ATCGGTTGAT TCTATTCTCT GCTTTGGTTT TAGTATTGTT TTTAATGTGG
GATGCTTGGC AAACGGACTA TGGCCCTATT CCACTTCTAC CTCCACCGCC TCAACCCACA
GCTAGCTCGG GAGAGTCTTC CCCGGTTCTG CCTGAGGCCG TTCCAGATGC GCCGCCACCC
GAAATGGCTG ATATGGATAC CGCTCCCATC CTAACAGGCC AAAAAACTAT CGAGGTAAAG
ACGGATCTCC TTGCGATCAA AATTGGAATG GCTAGTGGCG ATTTGTATGA AGTACAGCTA
CTGAATTATC CGGTTTCCTT AAAAAAACCT AATGAACCAG TCACATTATT GCATAAAAGG
GATCCTGATC TTTTTGTTAC TCAATCGGGA TTACGTGCTG CTTCCGGGCC ATCCATAACC
CATGAAACAG TACAGTTTTC AGCGCCTAAG ACCTACTATG AACTGATAGA AGATGAAAGC
AGTCTGAAAG TTCCCCTCAC TTGGGAGGAC GAGAATGGAA TTAAGGTAAC GAAGACCTAC
ATATTTCAGA GGGATAGCTA TCAGATCGAT TTAAATATCA AGATTGAAAA TGGAACGGAT
CAAGCTTGGA TGGGGAGGGC TTACGCTCAA TTCAGCCGTA CTCCACCGGA ATCTGGAGGT
ATGTTTGCCC GCTCTTATGT GGGTGCAGTT TTTTCCACAC AGGAACAGGA ATACCAGAAA
GTAGATTTTG GTGACTTAGC CTCGCAGTCT TTTGATCGCC GTAGTTCTGG GGGGTGGGTA
GCGATGATTC AGCATTATTT TGTGGCGGCT TGGGTACCTC GGGAACAAGG AACCAATTAT
TATTATGGTA AGCATGTACA AAACTCCCGC TATATTGCGG GAGTCATGCC TCCTCAGCAA
ACGATAGCTC CGGGTGAAAG CGGGCAATTT AATTTGGCCT TATTTACAGG CCCTAAAATC
CAAGATCAGC TAGCTGCCGT AGCTCCTAAG CTAAATTTGA CTGTAGATTA TGGCAAGCTG
ACTATCCTTG CCGAGCCGCT TTTCTGGCTG ATGAGTTGGT TTCACAACCT AGTAGGTAAC
TGGGGATGGG CCATCGTGTT GCTAACCTTT GTGGTGAAGC TTGTTTTCTT CAAGCTTTCC
CAGACTAGCT ATCGATCTAT GGCTCGAATG CGCAAACTGC AACCCCGTCT CCTCGCCCTC
AAGGAGCGTT ATGGCGATGA TCGCCAAAAA GTGGGCCAAG CTATGATGGA ATTGTATAGG
AAAGAGAAAG TTAACCCTAT GGGAGGATGT CTACCCATAG TGGTGCAAAT TCCTGTATTT
ATTGCCCTCT ATTGGATGTT GCTGGAATCG GTCGAATTGC GCCAAGCACC ATTTATCTTT
TGGATTCAAG ACCTAACTTC CAAAGATCCC TATTACATAT TGCCCTTATT AATGGGTGTG
AGCATGTTTG TTCAGCAGAA GTTAAGCCCG GCGCCAACCG ACCCCATACA GGCAAAGGTT
ATGGCCTTGA TGCCAGTCAT GTTTACCGTT TTTTTCGTTA TGTTCCCGGC GGGGTTGGTT
TTATATTGGG TAGTCAATAA TATCCTTTCC ATTGCCCAGC AATGGTACAT TACCCGTCAG
ATCGAACAAG AAGGCTAA
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| Protein sequence | MENYRLILFS ALVLVLFLMW DAWQTDYGPI PLLPPPPQPT ASSGESSPVL PEAVPDAPPP
EMADMDTAPI LTGQKTIEVK TDLLAIKIGM ASGDLYEVQL LNYPVSLKKP NEPVTLLHKR
DPDLFVTQSG LRAASGPSIT HETVQFSAPK TYYELIEDES SLKVPLTWED ENGIKVTKTY
IFQRDSYQID LNIKIENGTD QAWMGRAYAQ FSRTPPESGG MFARSYVGAV FSTQEQEYQK
VDFGDLASQS FDRRSSGGWV AMIQHYFVAA WVPREQGTNY YYGKHVQNSR YIAGVMPPQQ
TIAPGESGQF NLALFTGPKI QDQLAAVAPK LNLTVDYGKL TILAEPLFWL MSWFHNLVGN
WGWAIVLLTF VVKLVFFKLS QTSYRSMARM RKLQPRLLAL KERYGDDRQK VGQAMMELYR
KEKVNPMGGC LPIVVQIPVF IALYWMLLES VELRQAPFIF WIQDLTSKDP YYILPLLMGV
SMFVQQKLSP APTDPIQAKV MALMPVMFTV FFVMFPAGLV LYWVVNNILS IAQQWYITRQ
IEQEG
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