Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Noc_3080 |
Symbol | |
ID | 3705658 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nitrosococcus oceani ATCC 19707 |
Kingdom | Bacteria |
Replicon accession | NC_007484 |
Strand | - |
Start bp | 3472149 |
End bp | 3472952 |
Gene Length | 804 bp |
Protein Length | 267 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 637739554 |
Product | F0F1 ATP synthase subunit A |
Protein accession | YP_345051 |
Protein GI | 77166526 |
COG category | [C] Energy production and conversion |
COG ID | [COG0356] F0F1-type ATP synthase, subunit a |
TIGRFAM ID | [TIGR01131] ATP synthase subunit 6 (eukaryotes),also subunit A (prokaryotes) |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.00958832 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGAGCGCCG AAAGCAATCC CGTAGAATAT ATTAACCACC ATCTCACGAA TTTGTGCATT GGTCAGTGCG AGAGCATGGG GTTCTGGAGC TTAAAGCTCG ACACCCTTTT TATCAGCCTT GGGTTGGCAG CACTGCTAGT CTATGCCAGT TATCGCGTAG GCCGTCATCT TCATTTATCG GAACCTGGCG GGATGCAGAA TGTGCTAGAG GTCGTCGTTG AATTTGTGGA TCAGCAAGTC AAGGATATTT TTCCTGGCCG TAACCCCCTT ATTGGACCTC TTGCTATTAC GGTTTTTCTA TGGGTGTTTT TAATGAATGC CATGGATCTG ATTCCCGTAG ACCTGTTGCC TAAGCTTGCT GAAGTGATGG GCATTCATGG TTTCAAAGCC GTGCCGACTA CCGAGATTGA TACTACCTTT GCCTTAGCGC TAACCGTGTT TGCCCTTATT ATTTACTACA ACGTTAAAAT AAAGGGCCCA CTCGGTTACA TCAAACAATT TCTTTTTCAC CCATTTGGTA AGTATTTGGT CCCTATTAAT ATCATTATGA CTACCATTGA GGAGGTTGCT AAGCCTGTTT CCCTAGGTCT GCGGCTATTT GGCAATATGT TTGCTGGTGA GCTTGTTTTT CTACTTATTG CCTTATTGTC GTTAGCAGGT TTTGGAGCAG CGTGGCTACC TCAGGTCATA CTGGGTACTC TGTGGGCCAT CTTTCATATT CTAGTGATTA CTATTCAGGC GTTTATTTTT ATGCTGCTCA CCATTGTTTA CCTTGCTATG GCTCATACTG AGGAAGAACA TTAG
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Protein sequence | MSAESNPVEY INHHLTNLCI GQCESMGFWS LKLDTLFISL GLAALLVYAS YRVGRHLHLS EPGGMQNVLE VVVEFVDQQV KDIFPGRNPL IGPLAITVFL WVFLMNAMDL IPVDLLPKLA EVMGIHGFKA VPTTEIDTTF ALALTVFALI IYYNVKIKGP LGYIKQFLFH PFGKYLVPIN IIMTTIEEVA KPVSLGLRLF GNMFAGELVF LLIALLSLAG FGAAWLPQVI LGTLWAIFHI LVITIQAFIF MLLTIVYLAM AHTEEEH
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