Gene Noc_3078 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoc_3078 
Symbol 
ID3705656 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrosococcus oceani ATCC 19707 
KingdomBacteria 
Replicon accessionNC_007484 
Strand
Start bp3471283 
End bp3471753 
Gene Length471 bp 
Protein Length156 aa 
Translation table11 
GC content51% 
IMG OID637739552 
ProductF0F1 ATP synthase subunit B 
Protein accessionYP_345049 
Protein GI77166524 
COG category[C] Energy production and conversion 
COG ID[COG0711] F0F1-type ATP synthase, subunit b 
TIGRFAM ID[TIGR01144] ATP synthase, F0 subunit b 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.0404416 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAATGTAA CTGTTACACT CATCGGCCAG ATGGTAGCCT TCGGGATTCT AGTCTGGTTC 
GTCAACCGCT TTCTTTGGGG GCCTTTGACT AACCTGATGG AGGAACGGAA GAAGCGGGTT
GCTGACGGTT TAGCTGCGGC TGAACGTGGC AAGCATGAGC GGGAATTAGC AGAAAAACGT
GCCAAGGAAA CCCTGCATGA AGCCAAAGAA AAGGCTGCCG AGATTATTAC CCAGGCTCAA
AAACGTGCCG GTGAAATCAT CGAAGAAGCT AAGGAGGCAG CCCAAGCTGA GGGGGAGCGG
TTAAAGGTCT CAGCTAATGC TGAAATTCAG CAGGAGATGA ATCGTGCCCG CGAGGATCTG
CGGGGCCAAG TGGTATCGAT TGCCGTCGCT GGCGCTAGCA AGATTCTCAA ACGAGAGCTT
GATGAAAAGG CAAACGAAGC CTTGGTAAAA GAATTAGTTG CTCAGATTTA G
 
Protein sequence
MNVTVTLIGQ MVAFGILVWF VNRFLWGPLT NLMEERKKRV ADGLAAAERG KHERELAEKR 
AKETLHEAKE KAAEIITQAQ KRAGEIIEEA KEAAQAEGER LKVSANAEIQ QEMNRAREDL
RGQVVSIAVA GASKILKREL DEKANEALVK ELVAQI