Gene Noc_3077 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoc_3077 
Symbol 
ID3705655 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrosococcus oceani ATCC 19707 
KingdomBacteria 
Replicon accessionNC_007484 
Strand
Start bp3470724 
End bp3471260 
Gene Length537 bp 
Protein Length178 aa 
Translation table11 
GC content47% 
IMG OID637739551 
ProductF0F1 ATP synthase subunit delta 
Protein accessionYP_345048 
Protein GI77166523 
COG category[C] Energy production and conversion 
COG ID[COG0712] F0F1-type ATP synthase, delta subunit (mitochondrial oligomycin sensitivity protein) 
TIGRFAM ID[TIGR01145] ATP synthase, F1 delta subunit 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.26673 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCTGAGA AGATAACGAT TGCTCGACCG TATGCCAATG CGGTATTTGA GCTAGCCCAG 
GCACAAAAGA ACTATGATCA GTGGTCACGG GTACTAAATG TATTCGCAGA CTTGGCTAGG
GATTCGGAAA TGCAAATTTT GATTGACGAT CCGCGCTACA CTTCCGAGCA GCTCATTGGG
CTATTCGTTG AAATCGGAGG TGATACGGTA ACCGAATCTG CTAAAAACTT TATTAAAATA
TTGGCTGATA ATCGTCGCCT GTCCGTTCTT CCGGAGGTTG CTGCTTTGTT TGAGCAGCTA
CGAGCCGAGA TCGAAGGAAC ATTAGAAGTT GAGATTATTT CGGCTAAGCC GCTAGCTGAG
GAGCAATTAA ATGAAATTGC GAGTGCTCTC AAACGTCGAC TAGGGCGTGA GGTGACCTTT
TCCCGTAAAA CCGACGAATC CCTGTTGGGT GGCGTCATTA TTCGCGCTGG CGATTTAGTT
ATTGATGGGT CTGCTATCGG GAAACTTAAT CAGTTGGCCG CTTCATTACT GCATTAG
 
Protein sequence
MAEKITIARP YANAVFELAQ AQKNYDQWSR VLNVFADLAR DSEMQILIDD PRYTSEQLIG 
LFVEIGGDTV TESAKNFIKI LADNRRLSVL PEVAALFEQL RAEIEGTLEV EIISAKPLAE
EQLNEIASAL KRRLGREVTF SRKTDESLLG GVIIRAGDLV IDGSAIGKLN QLAASLLH