Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Noc_3069 |
Symbol | |
ID | 3704485 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nitrosococcus oceani ATCC 19707 |
Kingdom | Bacteria |
Replicon accession | NC_007484 |
Strand | - |
Start bp | 3459792 |
End bp | 3461954 |
Gene Length | 2163 bp |
Protein Length | 720 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 637739543 |
Product | HAD family hydrolase |
Protein accession | YP_345040 |
Protein GI | 77166515 |
COG category | [M] Cell wall/membrane/envelope biogenesis [R] General function prediction only |
COG ID | [COG0438] Glycosyltransferase [COG0561] Predicted hydrolases of the HAD superfamily |
TIGRFAM ID | [TIGR01482] Sucrose-phosphate phosphatase subfamily [TIGR01484] HAD-superfamily hydrolase, subfamily IIB [TIGR01485] sucrose-6F-phosphate phosphohydrolase [TIGR02468] sucrose phosphate synthase/possible sucrose phosphate phosphatase, plant [TIGR02471] sucrose phosphate synthase, sucrose phosphatase-like domain, bacterial [TIGR02472] sucrose-phosphate synthase, putative, glycosyltransferase domain |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATCAGC CCGATGATGG CCTATATATT GTGCTTATCA GCCTCCATGG TCTTATTCGT GGCCATGAGC TGGAATTAGG CCGAGATGCT GATACTGGTG GCCAGACAAA ATACGCCATT GAGCTGGCCC GAGCCCTTGC AGAAAATCCT CAAGTTGGCC GGGTTGATTT ATTAACGCGA AAGGTTATCG ATCCTAAAGT AGGGCAAGAC TATAGCGAAC CGCTAGAATA TCTTGCCCCT CGAGCTCAGA TTGTACGCTT ATCTTGTGGT CCGCGCCGCT ACCTGCGTAA AGAAGTATTA TGGCCTTATC TAGGTAGTTT CGCCGATTAT GCGCTACAGC ATATTCGCCG CATCGGTCGC CTCCCCGATA TCATTCACTC CCATTATGCG GATGCTGCTT ATGTAGGGGT AAGGCTGGCA GGTTTACTAG GCGTACCGCT AGTGCATACG GGCCATTCCT TAGGCCGGGT AAAACGGCAC CGGCTCCTTG AAGGGGGAAC CAAAGAGGAG AGTATTGAAA CTCGGTACAA TATGCGGCAA CGGATTGAGG CTGAAGAACA AGTCCTTAGC ACAGCAGCTC TGGTGGTTGC AAGTACCCAG CAGGAAGTGG ATGAACAGTA TGCCCTCTAT GATAACTATC ACCCAAAACG GATGGTAGTG ATTCCTCCCG GCACCGATCT GGAGCGTTTT CACCCGCCCT CCCGTTTTTG GCGTAATGCA CCGATTGAGC AGGAAATAAA TCGTTTTCTA TCCTACCCCC GTAAACCTCT TATCCTGGCT TTATCCCGGC CAGATGCGCG GAAAAATATT TCTACTTTGA TCCGTGCCTA TGGAGAAAAC CCGGCGCTAC GCCAAAAGGT TAATTTAGTA TTAATAGTGG GTAACCGGGA TGATATCGGT ACCATGGAGA AAGGACCAAG GACGGTACTA AAAGAGATAT TATTATTAAT TGACCGCTAT GATCTTTATG GCAGTATTGC CTATCCCAAG CATCATGAAG TTGATGATGT GCCAGATTTA TACCGTTTAG CGGCGCGGTC GAAAGGCGTT TTTATTAATC CCGCACTTAC TGAACCCTTT GGCCTCACAT TAATTGAGGC GGCAGCAAGT GGTTTACCTG TTATTGCTAC CCACGATGGG GGCCCCCGGG AAATATTAGA GCACTGCAAG AACGGATGCC TCATTGATCC CCTGGATGCG GATCGGATGG GCAAGGTACT GCTTGAGTCT CTTTCTGATC GCAACCGCTG GCACCGATGG GCTAAAAACG GCCTTAAGGG TGCCCAGCAG TATTACTCCT GGCCAGGACA TGTCACTCAA TATTTGCGCG AGGTGAGTAA AGTCATCCGG AAGGCGAAAA AACCCAGGCT CCAAGCGAAA AAAAAGAGCC GCTTACCCAT TTCCGAAAAG GTTTTGGTCT GTGATATTGA CAATACCTTA ACCGGAGATG GAGAGGGCCT TCGCAGCTTG TTTGAAAGCC TCAAGGAGGC AGGCGCTAAA ATTGGTTTTG GTATTGCTAC CGGGCGGAAT TTTGCTAGTA CTCTCAAAGT GCTTAAGAAA TGGGATATTC CTCTGCCTGA TCTTCTGATT ACGGGGGTAG GGTCTCAAAT TTTCTACGGG CCAAATTTGG TGGAAGATCA AAGCTGGCAG CAACATATCC GTTACCGTTG GAAGCGGGAA TCTATCCTCA AGGCGATGGC TGATATTCCT AATTTGCGTC TTCAGCCTTC CAGTGAACAG TTACCTTGTA AGATCAGCTA TGATGTAGAT GTTAAAAAAG GGCTTGATAT CCCAGCCATT GCCCGCCACC TGCGGCAGTT GGACTTGAGC GCCAATATTA TCTATTCCTA TCAGGCTTAT CTGGATTTAT TGCCGGTGCG GGCTTCTAAG GGAAGCGCGG TTCGTTTTTT CTGCGACAAA TGGGGTATTC CCCTAGAGCA CCTCCTTGTG GTGGGCGACT CCGGCAGTGA TAAAGAAATG CTATCTGGGA ATACTTTAGG GGCGGTTGTG GGTAACTATA GCCCTGAACT TGAGTATCTG CGTGAAGATT CCAGTATTTA TTTTGCTCAA GGCCATCATG CCTGGGGGAT TTTAGAGGCA TTAGCACATT ATGGCTTTCT TGAGCAGGAG AAAGCGGTAG TGGCCAAGGA AGAGGCACTA TGA
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Protein sequence | MNQPDDGLYI VLISLHGLIR GHELELGRDA DTGGQTKYAI ELARALAENP QVGRVDLLTR KVIDPKVGQD YSEPLEYLAP RAQIVRLSCG PRRYLRKEVL WPYLGSFADY ALQHIRRIGR LPDIIHSHYA DAAYVGVRLA GLLGVPLVHT GHSLGRVKRH RLLEGGTKEE SIETRYNMRQ RIEAEEQVLS TAALVVASTQ QEVDEQYALY DNYHPKRMVV IPPGTDLERF HPPSRFWRNA PIEQEINRFL SYPRKPLILA LSRPDARKNI STLIRAYGEN PALRQKVNLV LIVGNRDDIG TMEKGPRTVL KEILLLIDRY DLYGSIAYPK HHEVDDVPDL YRLAARSKGV FINPALTEPF GLTLIEAAAS GLPVIATHDG GPREILEHCK NGCLIDPLDA DRMGKVLLES LSDRNRWHRW AKNGLKGAQQ YYSWPGHVTQ YLREVSKVIR KAKKPRLQAK KKSRLPISEK VLVCDIDNTL TGDGEGLRSL FESLKEAGAK IGFGIATGRN FASTLKVLKK WDIPLPDLLI TGVGSQIFYG PNLVEDQSWQ QHIRYRWKRE SILKAMADIP NLRLQPSSEQ LPCKISYDVD VKKGLDIPAI ARHLRQLDLS ANIIYSYQAY LDLLPVRASK GSAVRFFCDK WGIPLEHLLV VGDSGSDKEM LSGNTLGAVV GNYSPELEYL REDSSIYFAQ GHHAWGILEA LAHYGFLEQE KAVVAKEEAL
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