| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noc_3063 |
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| Symbol | |
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| ID | 3704479 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrosococcus oceani ATCC 19707 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007484 |
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| Strand | + |
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| Start bp | 3452086 |
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| End bp | 3453492 |
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| Gene Length | 1407 bp |
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| Protein Length | 468 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 637739537 |
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| Product | amino acid permease-associated region |
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| Protein accession | YP_345034 |
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| Protein GI | 77166509 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0531] Amino acid transporters |
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| TIGRFAM ID | [TIGR00909] amino acid transporter |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.313511 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAACTGT TTCGAACTAA GCCCATCGAA ACGGATCTAG CTAAGGATAC CGGCCTTAGA
AAAGTGCTGG GAGCGTTTGA TCTGGTCTTA CTTGGCATTG GCGCCATTAT CGGCGCTGGT
ATTTTTGTGC TGACGGGTAT TGCCGCAGCG AATTATGCTG GACCTGCCGT GGTCTTATCT
TTTGTGGTAG CGGGAATGGC AGTTACTTTG GCTGCCCTTT CCTACGCAGA ACTAGCTGCC
TTTATCGGCG GTGCTGGCAG CGCCTATGGA TATGGCTATG CCGGTTTAGG TGAATTTGTG
GCTTGGGTCA TTGGCTGGAT GCTGATTCTG GAATATACCG TTGCAATATC TGCGGTATCA
GTGGGCTGGT CAGGTTATGT TGGCAATGCA TTGGCAGCAA TGCAAATGCA TCTGCCCGAC
GTGCTGACAC AAACGCCTTC TCAGGGTGGC TGGGTCAATC TGCCAGCAAT GCTCATCATT
CTTATCCTCG GAATTCTTCT TGCTACTGGT GCTAAGGTAA GCGCCCACTT CAACGCTATC
ATGGTATTTG TTAAAGTTGC CGCCATACTG CTATTCATTG GTGTTGCCTT CTTCCATGTA
GATACTAATC ACTGGACTCC CTTTATGCCC TTTGGTTGGC AGGGAGTCAT GACCGGCGCA
GCCAGTATTT TTTTTGCTTA TATCGGCTTT GATGCTGTCT CCACGGCAGC TGAGGAGACC
CGGAATCCAC AAAAGGATCT GCCCATTGGA ATCCTAGGAT CTCTCGCTAT TTGCACGTTG
CTTTATATGC TAGTGGCTGC GTTATTAACC GGCATTGTAC CTTACTCCTC CCTAGATGTT
CCCTCCCCGG TTTCTGAAGC CCTCCTCCAG GTAGGTGCGA AGTGGGCCTC CGGGATGATT
GCTATCGGCG CTATTGCCGG CCTTACTACC GTCATGTTGG TCCTGTATTT TGGGCTGACC
CGGATTCTAT TTGCTATTTC ACGGGACGGC TTATTGCCGC CCTTTTTTTC TCATATAAAC
AATAGGACCG GTAGCCCCGT ACGTGTGATT CTGCTATCTG GTTTAGCAAT GGCAAGCATT
GCAGGCTTCG CTCCCCTAAA TGATATTGTC GAGCTTACCA ATATTGGCAC ACTCGGTGCC
TTCACAGTAG TTTGTGCTGG AGTCGCTGTA TTACGCTACA CTAGACCGGA GTTACACCGA
CCGTTCCGAA TTCCATTTAG TCCTGCCGTC CCGCTGCTAG GAATAGCCTT CTGCGTGTAT
TTGATGACCC AGTTGAGCGC AGATACTTGG ACTCGGTTTT CAGTATGGCT GGCAGCAGGG
CTAGTCATTT ACTTTACTTA CTCCTACCGC CACAGTAAAC TCTCTGCCCC GGAGGAAAGC
AAACCAGCCC ATGCGCCGCT TGAGTAA
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| Protein sequence | MKLFRTKPIE TDLAKDTGLR KVLGAFDLVL LGIGAIIGAG IFVLTGIAAA NYAGPAVVLS
FVVAGMAVTL AALSYAELAA FIGGAGSAYG YGYAGLGEFV AWVIGWMLIL EYTVAISAVS
VGWSGYVGNA LAAMQMHLPD VLTQTPSQGG WVNLPAMLII LILGILLATG AKVSAHFNAI
MVFVKVAAIL LFIGVAFFHV DTNHWTPFMP FGWQGVMTGA ASIFFAYIGF DAVSTAAEET
RNPQKDLPIG ILGSLAICTL LYMLVAALLT GIVPYSSLDV PSPVSEALLQ VGAKWASGMI
AIGAIAGLTT VMLVLYFGLT RILFAISRDG LLPPFFSHIN NRTGSPVRVI LLSGLAMASI
AGFAPLNDIV ELTNIGTLGA FTVVCAGVAV LRYTRPELHR PFRIPFSPAV PLLGIAFCVY
LMTQLSADTW TRFSVWLAAG LVIYFTYSYR HSKLSAPEES KPAHAPLE
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