Gene Noc_3055 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoc_3055 
Symbol 
ID3704471 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrosococcus oceani ATCC 19707 
KingdomBacteria 
Replicon accessionNC_007484 
Strand
Start bp3448481 
End bp3448879 
Gene Length399 bp 
Protein Length132 aa 
Translation table11 
GC content48% 
IMG OID637739529 
Productphosphoribosyl-AMP cyclohydrolase 
Protein accessionYP_345026 
Protein GI77166501 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0139] Phosphoribosyl-AMP cyclohydrolase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.267486 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCTCTCG GTTGGTTAGA AGACGTGGCT TGGAACAAGG AAGGACTTAT CCCTGCGATT 
GCCCAGGAAG ATCGCACCGG CCAAGTACTG ATGCTCGCCT GGATGAACCG AGAAGCCTTA
GAAACCACCG TACAATCAGG CTACGCGGTT TATTGGTCTC GATCCAGAAA GCGTTTATGG
CGTAAGGGCG AGCAATCCGG GCACGAGCAG ATCATTAAAG CTATTCATCT GGACTGCGAT
AGCGACGCGG TGCTTTTATT GGTCGAACAA AAGGGGGGAA TGGCTTGTCA TACTGGTCGT
CATCGGTGCT TTTTCAAACG CTTAGAGAAA GGAAATTGGG CAAGTGTTGA ACCCGTATTG
AAATCTCCAG ATAGCATCTA CAATAACTCA GATGAATAA
 
Protein sequence
MSLGWLEDVA WNKEGLIPAI AQEDRTGQVL MLAWMNREAL ETTVQSGYAV YWSRSRKRLW 
RKGEQSGHEQ IIKAIHLDCD SDAVLLLVEQ KGGMACHTGR HRCFFKRLEK GNWASVEPVL
KSPDSIYNNS DE