| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noc_3053 |
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| Symbol | |
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| ID | 3704469 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrosococcus oceani ATCC 19707 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007484 |
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| Strand | + |
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| Start bp | 3446954 |
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| End bp | 3447703 |
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| Gene Length | 750 bp |
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| Protein Length | 249 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 637739527 |
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| Product | 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase |
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| Protein accession | YP_345024 |
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| Protein GI | 77166499 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0106] Phosphoribosylformimino-5-aminoimidazole carboxamide ribonucleotide (ProFAR) isomerase |
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| TIGRFAM ID | [TIGR00007] phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 0.691836 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTATTAA TACCTGCCAT TGATCTCAAG GGGGGAAAAT GCGTTCGCCT GCGTCAAGGG
CGCATGGAAG ACGATACCGT ATTTTCTGAT GATCCAGTCG CCGTGGCCTT ACATTGGGCA
GAAGCCGGTG CAAAACGGCT TCACTTAGTT GACCTAGACG GAGCGTTCGC GGGACAACCG
GTTAATGCTG ATATCATTTA TCATATTGCC CAAGCATTAC CTGATATGGA TATTCAGGTA
GGAGGAGGCA TTCGCGATAG CGATACTATC CAGACCTACT TGGATGCGGG AGTTCGCTAT
GCCATCATCG GCACCAAGGC CATCAATGCG CCCCATTTCG TCGCTGATGC TTGTTTGGAG
TTTCCAGGCC ATATTCTCCT TGGCCTGGAT GCACGAGAGG GCAAAATTGC GATTAACGGG
TGGTCCAAAC TCTCCCGGCA TAATTTAATC GATATTGCTC AACGCTTTGA AAAAGATGGA
GTTGAGGCCA TTATTTACAC TGATATTCAG CGCGATGGCA TGATGAAGGG AGTCAACATT
GAGGCCACTA GCGAGCTGGC CAAAGCGATT AATATTCCTG TCATTGCTTC GGGCGGTGTT
TCCTCGCTAA CAGAGATAGA AGCTCTATGC CAACATGAAC AAGATGGCAT TGGAGGAGCG
ATCATTGGCC GGGCTCTCTA TGAGGAGAAA ATCCAGCTTG CTGAAGCCCT CGCCATAGCC
AAACGCCTCT CTGGGGAGTC AACAGCGTAA
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| Protein sequence | MLLIPAIDLK GGKCVRLRQG RMEDDTVFSD DPVAVALHWA EAGAKRLHLV DLDGAFAGQP
VNADIIYHIA QALPDMDIQV GGGIRDSDTI QTYLDAGVRY AIIGTKAINA PHFVADACLE
FPGHILLGLD AREGKIAING WSKLSRHNLI DIAQRFEKDG VEAIIYTDIQ RDGMMKGVNI
EATSELAKAI NIPVIASGGV SSLTEIEALC QHEQDGIGGA IIGRALYEEK IQLAEALAIA
KRLSGESTA
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