Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Noc_3048 |
Symbol | |
ID | 3704347 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nitrosococcus oceani ATCC 19707 |
Kingdom | Bacteria |
Replicon accession | NC_007484 |
Strand | - |
Start bp | 3443570 |
End bp | 3444046 |
Gene Length | 477 bp |
Protein Length | 158 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 637739522 |
Product | hypothetical protein |
Protein accession | YP_345019 |
Protein GI | 77166494 |
COG category | [S] Function unknown |
COG ID | [COG5488] Integral membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.00000000244651 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGTTTGCA AGCGGTATGG ACCTTCGGAA GATACGCTTC GGTTTATCCT TCGACCCAAT AGCTCTTTGA GCTGGAGAGG AATGAAGGCA GTTTTTTTTG CTATGACACT AGTTCTCGTC ATAATAGCCG GAGGGTTTAG TCTTTTAGGT CTATGGTTGA TTTTTCCGTT TGCTGGGCTA GAACTGCTCA TTTTGGGAAT CGCATTTTAT CTGTCTGCGC GCCGTGCTCA ACACTGTGAA ATCATTACCA TCGGTCAGGA GGAGATTGAA ATTTTTCGTG GCCGCGAAAC GACGGGTGAA ACATGGAAGT TTCATCGCTA TTGGGCTCGG GTTAGAATTG AGCTTCCACC CTATGCGTGG CATATGAGCC GCTTAATAAT AGGTTCTCAC GGGCACGAAG TAGAAATTGG CGTTTTCCTG AGCGAGGAGG AGCGTCTCCG TTTAGCCAAG GAGTTGCAGG CGGTTTGTGG CGCCTAA
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Protein sequence | MVCKRYGPSE DTLRFILRPN SSLSWRGMKA VFFAMTLVLV IIAGGFSLLG LWLIFPFAGL ELLILGIAFY LSARRAQHCE IITIGQEEIE IFRGRETTGE TWKFHRYWAR VRIELPPYAW HMSRLIIGSH GHEVEIGVFL SEEERLRLAK ELQAVCGA
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