| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noc_3047 |
|---|
| Symbol | |
|---|
| ID | 3704346 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nitrosococcus oceani ATCC 19707 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007484 |
|---|
| Strand | - |
|---|
| Start bp | 3442605 |
|---|
| End bp | 3443450 |
|---|
| Gene Length | 846 bp |
|---|
| Protein Length | 281 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 637739521 |
|---|
| Product | cytochrome c oxidase, subunit II |
|---|
| Protein accession | YP_345018 |
|---|
| Protein GI | 77166493 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1622] Heme/copper-type cytochrome/quinol oxidases, subunit 2 |
|---|
| TIGRFAM ID | [TIGR02866] cytochrome c oxidase, subunit II |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 2 |
|---|
| Plasmid unclonability p-value | 0.000000013174 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGGCGTAT TTAATAGACA AAGCTTATTC GCAACAATTA TAGGAGGTAC TGGTTTATTC
CTAGTGAGTG GGAATGCCTG TGCCGAGCTA GGTTTGAATT TGACGAGGGG AGTTACCCCT
ACCTCAGAGG AGATATACGA TCTTCACATG CTTATTTTCT GGATTTGCGT GGGTGTCGGT
ATTTTGGTGT ACGGCATCAT GGCGTGGTCT ATTTACCATC ACCGTAAATC CAAGGGCGCG
GTAGCCAGTC AGTTCCACGA GAACCTTACT CTCGAAGTAA CATGGACGGT TATTCCACTT
TTAATCCTCA TTGCTGTCGC GGTACCTGCT ACTTCCGCCA TGGTTCGCAT CTACGATAGC
TCTGCTTCTG ACCTCACAAT AAAGGTGACG GGTTATCAAT GGCGGTGGCA CTATGAGTAT
GTGGACCATG ACTTTGGTTT CACGAGCAGC CTGTCTACTC CTTTTGATCA GATAGTAAAT
AAAGCCCCCA AAGGTGAGCA TTATTTGCTT GAGGTGGATA ATCCATTGGT GCTCCCAACC
GATAAGAAAG TGCGTTTCGT TATTACCGCC GATGATGTCA ATCATGCTTT CTGGGTGCCT
GCCTTTGGTT TCAAGCAAGA TGCGATTCCA GGCTTTATTA ACGAGGCATG GGCGGTTATA
CAAGAACCCG GTATTTACCG GGGACAATGT GCAGAGCTTT GCGGCCGGGG GCATGGCTAT
ATGCCTATCG TTGTGGAAGC CAAAACTCCG GAAGAATTTG ATAAATGGAT GGCTGAAAGC
AAAGCCGCAC AGTCCGGGGA GGGGGCGAAT GCCGTCATTC AATCGGCTCA AGCAGAGGCA
CACTAG
|
|---|
| Protein sequence | MGVFNRQSLF ATIIGGTGLF LVSGNACAEL GLNLTRGVTP TSEEIYDLHM LIFWICVGVG
ILVYGIMAWS IYHHRKSKGA VASQFHENLT LEVTWTVIPL LILIAVAVPA TSAMVRIYDS
SASDLTIKVT GYQWRWHYEY VDHDFGFTSS LSTPFDQIVN KAPKGEHYLL EVDNPLVLPT
DKKVRFVITA DDVNHAFWVP AFGFKQDAIP GFINEAWAVI QEPGIYRGQC AELCGRGHGY
MPIVVEAKTP EEFDKWMAES KAAQSGEGAN AVIQSAQAEA H
|
|---|
| |