| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noc_3046 |
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| Symbol | |
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| ID | 3704345 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrosococcus oceani ATCC 19707 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007484 |
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| Strand | - |
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| Start bp | 3440857 |
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| End bp | 3442455 |
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| Gene Length | 1599 bp |
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| Protein Length | 532 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 637739520 |
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| Product | cytochrome c oxidase |
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| Protein accession | YP_345017 |
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| Protein GI | 77166492 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0843] Heme/copper-type cytochrome/quinol oxidases, subunit 1 |
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| TIGRFAM ID | [TIGR02891] cytochrome c oxidase, subunit I |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.00000491174 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCACAG TAGCAGCACA CGGTGATCAC GCGCATCACC CTACCGGCAT CATGCGCTGG
TTGACAACCA CCAACCATAA GGATATTGGT ACCTTATACC TGTTTTTTAG CCTTACTATG
TTTTTTGTTG GCGGCGCGAT GGCGCTGACA TTCCGTACCG AACTTTTTGC GCCTGGATTA
CAAATTCTAG ATCCCCAAAG ATTTAATGAG TTGGTGACCC TGCATGGGTT AGTCATGATC
TTTGGCGCGA TGATGCCCGT TCTAGCGGGT TTAGCTAACT GGCAAATACC GCTTATGATT
GGCGCGCCTG ATATGGCTTT GCCGCGGTTA AATAACTGGA GCTTCTGGCT CTTACCCTTT
GCCATGCTTT TGCTTCTTAG CAGTTTGCTG GTGCCGGGCG GAGCAGCGGC TGGGGGATGG
ACCATGTACC CACCCTTGTT TATCCAGGGC GGGGTTGGCA TTGATATGAC CATCTTTTCT
GTCCATCTTC TGGGACTTTC TTCCATATTG GCGTCGATCA ATATTATTGT TACCGTCCTA
AACATGCGAG CACCTGGCAT GGGTCTGATG AAAATGCCTA TGTTCGTCTG GGGATGGTTG
ATCACTGCCT TTTTGCTGGT TGCGGTGGCT CCGGTACTTG CGGGCGCCGT GACCATGGAG
CTTACCGACC GTCATTTTGG CACCAGTTTC TTTAATGCGG CTGGCGGCGG TGACCCGGTG
ATGTACCAGC ACATTTTCTG GTTTTTTGGC CATCCCGAAG TCTATATTAT GGTTTTACCT
ATTTTCGGGG TGATATCGGA TATTATTCCG ACTTTTGCCC GTAAGCCAAT ATTTGGCTAT
CACTCCATGG TCTACGCTTT AGCTTCGATT GCCTTCCTCT CCTTCATCGT GTGGGCGCAT
CACATGTTTA CCGTCGGCAT GCCGCTTTCA GGAGAGTTGT ACTTTATGTA TGCAACCGTC
CTGATTTCCG TTCCCACTGG GATCAAAATT TTTAATTGGC TTACCACCAT GTGGCGGGGT
TCCATGACTT TTGAGTTGCC CATGCTGTGG TCTATGGCCT TCATCGCTTT ATTTACTATT
GGCGGCCTGA CTGGCCTTAT GATGGGCGTA GCCGCGGCGG ATTTTCAGTA CCATGATACC
TATTTTATTG TTTCCCACTT CCACTATGTA TTTCTGCCGG TGACGCTATT TGGTACCTAT
GCTGCTGTTT ACTACTGGCT ACCTAAATGG ACTGGTAATT GGTATGACGC GCGTCTAGGG
AAATGGCATT TCTGGCTGTC CGTAATTTCA ATGAATATCG TTTTCTTTCC GCAGAATTTC
CTTGGCTTGG CGGGCATGCC GCGGCGAATT CCTGACTACG CCATTCAGTT CGCTGAATTC
AATGCGATTT CCACCATAGG TGCTTTCATT TTCGGTTTCT CTCAGTTGAT CTTTGTATAT
GTGATTATTA AGGCTATTCG TGGTGGCGCA GGTGTGGAAA AAGCTACCGA CCAGGTATGG
GAAGGCGCAA AGGGTTTAGA GTGGACACTT AGCTCTCCGC CCCCTTACCA TAGTTTCACA
ACTCCACCCC AAGTCACGGC GGAGAATAAT CCCCATTAA
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| Protein sequence | MSTVAAHGDH AHHPTGIMRW LTTTNHKDIG TLYLFFSLTM FFVGGAMALT FRTELFAPGL
QILDPQRFNE LVTLHGLVMI FGAMMPVLAG LANWQIPLMI GAPDMALPRL NNWSFWLLPF
AMLLLLSSLL VPGGAAAGGW TMYPPLFIQG GVGIDMTIFS VHLLGLSSIL ASINIIVTVL
NMRAPGMGLM KMPMFVWGWL ITAFLLVAVA PVLAGAVTME LTDRHFGTSF FNAAGGGDPV
MYQHIFWFFG HPEVYIMVLP IFGVISDIIP TFARKPIFGY HSMVYALASI AFLSFIVWAH
HMFTVGMPLS GELYFMYATV LISVPTGIKI FNWLTTMWRG SMTFELPMLW SMAFIALFTI
GGLTGLMMGV AAADFQYHDT YFIVSHFHYV FLPVTLFGTY AAVYYWLPKW TGNWYDARLG
KWHFWLSVIS MNIVFFPQNF LGLAGMPRRI PDYAIQFAEF NAISTIGAFI FGFSQLIFVY
VIIKAIRGGA GVEKATDQVW EGAKGLEWTL SSPPPYHSFT TPPQVTAENN PH
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