Gene Noc_3045 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoc_3045 
Symbol 
ID3704344 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrosococcus oceani ATCC 19707 
KingdomBacteria 
Replicon accessionNC_007484 
Strand- 
Start bp3440114 
End bp3440746 
Gene Length633 bp 
Protein Length210 aa 
Translation table11 
GC content46% 
IMG OID637739519 
Productcytochrome C oxidase assembly protein 
Protein accessionYP_345016 
Protein GI77166491 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG3175] Cytochrome oxidase assembly factor 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones8 
Plasmid unclonability p-value0.000121806 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTTGATT GCGGGTATAG CATTGGCTAT TTATATATTA TTCATATATC TGAATGCGAT 
AAGATGAATA CGACTGAAAG AGAGGCTACT AATCACAGGT TAGTAGCAAA ATTGGCCCTA 
ATGGTGGTAG CGATGTTCGG GTTTGGTTAT GCCATGGTGC CTCTCTACGA TGTAATTTGC 
GAAATTGCGG GCCTAAATGG CAAGCCAGAA AACGTAGCAG TGTCGGTTTC AGAAGCAGGA 
GCTATAGATA CCAGCCGAAC AATTACTGTT CAATTTCTGG CAAGCGTGAA TAGTCAGCTT 
TCCTGGGAGT TTAAACCGGA AGTGCAGGAA ATTCGCGTTC ATCCCGGCGA GGTAGCCAAG 
GTTACCTATT ATGCAAGTAA TCTGAATGAT CATTCCGTTA TTGGTCAGGC GATACCCAGC 
GTGAGTCCGG GGCTGGCGGC CAAGCATTTA CACAAGACCG AATGTTTCTG TTTCACTGAA 
CAAACGCTTC AGGCAGGTGA GACGCGGGAA ATGCCGGTAG TCTTTTTTGT CGATCCTAAG 
TTGCCACAAA ACTATTCTGA GATGACCTTG TCCTACACGT TCTTTGATGT GAGCGATAGG 
GCGAGCACCC AGATAGCAAC ACCTTCTGGG TAG
 
Protein sequence
MVDCGYSIGY LYIIHISECD KMNTTEREAT NHRLVAKLAL MVVAMFGFGY AMVPLYDVIC 
EIAGLNGKPE NVAVSVSEAG AIDTSRTITV QFLASVNSQL SWEFKPEVQE IRVHPGEVAK 
VTYYASNLND HSVIGQAIPS VSPGLAAKHL HKTECFCFTE QTLQAGETRE MPVVFFVDPK 
LPQNYSEMTL SYTFFDVSDR ASTQIATPSG