| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noc_3042 |
|---|
| Symbol | |
|---|
| ID | 3704341 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nitrosococcus oceani ATCC 19707 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007484 |
|---|
| Strand | - |
|---|
| Start bp | 3437887 |
|---|
| End bp | 3438618 |
|---|
| Gene Length | 732 bp |
|---|
| Protein Length | 243 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 637739516 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_345013 |
|---|
| Protein GI | 77166488 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3346] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.00140413 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGCTATTTC AGTTTAATAA TAAAGTCTCC TGGCCCAAAC TACGTTTTAC GGTAGCTTTT
CTACTCTTGA TTATTATTTT GGCCTCATTA GGTCTATGGC AATTGCAGCG AGCAAGCGAA
AAACACACTA TAGAGACCGT TCTTAAAGAG CGGAGTATTA GTGATTCTCT TCGGGTGGGA
GAGGAAAGAT TACAATTGCC GGATAGTGAA TATCGCCGGG GAATTGCACA AGGCTGGTTT
GATAATGAGC ATATTATATT TTTAGATAAT CAAATCCATA AGGGTCGGGC AGGTTATCAC
GTGCTGATAC CACTACGGTT TAACGATGGA GATGGAAGCG GGATACTTGT TAACTTTGGT
TGGCTTCCGA TGGAGCTAGA TCGGCAGGAG CTTCCACGGA TAGAGTCCCC TGATCTACGG
GTTAGCGCCC ATGGTGTTTT GCGGCAACCC TATCAGGCGC CTTTTTTCCT GGGGGGGGAG
GAAAGTAGAG AATCGAGCGG TTGGCCTAAG CTAGTTCAAT ATGTGAGCAT AGAGCAACTG
CAATCCCAAT TAGGTTATTT TTTGCAGCCG CTTATTCTCC AACTGGCTCC CGAAGAGTCC
TATGGATTTG TTCGTCAATG GCCCGAACCT CCAACCAGCG TGCAGCAGCA TATTGCTTAT
GCGGTTCAGT GGTTTGCTCT GGCGCTGATT GGTCTAATTA TATCTGTTAT TTTATATCGG
CGTAATTTCT AA
|
|---|
| Protein sequence | MLFQFNNKVS WPKLRFTVAF LLLIIILASL GLWQLQRASE KHTIETVLKE RSISDSLRVG
EERLQLPDSE YRRGIAQGWF DNEHIIFLDN QIHKGRAGYH VLIPLRFNDG DGSGILVNFG
WLPMELDRQE LPRIESPDLR VSAHGVLRQP YQAPFFLGGE ESRESSGWPK LVQYVSIEQL
QSQLGYFLQP LILQLAPEES YGFVRQWPEP PTSVQQHIAY AVQWFALALI GLIISVILYR
RNF
|
|---|
| |