Gene Noc_3041 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoc_3041 
Symbol 
ID3704340 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrosococcus oceani ATCC 19707 
KingdomBacteria 
Replicon accessionNC_007484 
Strand
Start bp3437221 
End bp3437835 
Gene Length615 bp 
Protein Length204 aa 
Translation table11 
GC content46% 
IMG OID637739515 
Producthypothetical protein 
Protein accessionYP_345012 
Protein GI77166487 
COG category[R] General function prediction only 
COG ID[COG1999] Uncharacterized protein SCO1/SenC/PrrC, involved in biogenesis of respiratory and photosynthetic systems 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.00218245 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGGTAATA GAAATTTAGA AGCAGCTAAC AAAGGGATTA TCCTGGCTAT TTTTGTTATA 
TGCGCTCTCC CCATAATAGG AGCCTGGTGG CTGTTGCAAG GATCAGAGAA GGGAGAGACG
TTTGCAACTC GTAATTACGG CGAACTTATT ATCCCAGCAA GGCCCCTTGG TGAGGCAACT
CTTGAGACCT TAGAAAGCAA GAAACTTGCT ATTGAAGAAC TTAGGGAGAA ATGGACGCTA
GTGGTTCTTG GGCCGGCGGA GTGCAATGAG ATTTGTCGCC AGAATCTTTA TGAAACACGC
CAGATTCGTT TGGCTACAGG CAAGGATATG CACCGGATTC AACGTCTGTG GGTTACCAAT
GATCTGAGTT TTCTTGATGA ATCAGGCTGG CTCCAGGAAC AACACCCTGA TCTCATTGTG
GCTTCTGAAG AAAAAGGCGA GGAAGGATTC GTAAACCAGT TTGTATTACC GGATGTTCCC
GATCCCTTAA TGGCGCAGCG GGTATACATC ATCGACCCTA TCGGTAATTT AGTGATTAGC
TATCCACCTG AAGAAACTCC CGAGCATATG CTTAAGGATC TTAAACGGCT ATTGTTTGTT
TCTCAAATAG GGTGA
 
Protein sequence
MGNRNLEAAN KGIILAIFVI CALPIIGAWW LLQGSEKGET FATRNYGELI IPARPLGEAT 
LETLESKKLA IEELREKWTL VVLGPAECNE ICRQNLYETR QIRLATGKDM HRIQRLWVTN
DLSFLDESGW LQEQHPDLIV ASEEKGEEGF VNQFVLPDVP DPLMAQRVYI IDPIGNLVIS
YPPEETPEHM LKDLKRLLFV SQIG