Gene Noc_3025 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoc_3025 
Symbol 
ID3705772 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrosococcus oceani ATCC 19707 
KingdomBacteria 
Replicon accessionNC_007484 
Strand
Start bp3421610 
End bp3422134 
Gene Length525 bp 
Protein Length174 aa 
Translation table11 
GC content47% 
IMG OID637739499 
ProductIS630 family transposase 
Protein accessionYP_344997 
Protein GI77166472 
COG category[L] Replication, recombination and repair 
COG ID[COG3335] Transposase and inactivated derivatives 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.05528 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACGGGGT ACACGCAGCG CTGTAATATG AAAAGAAAGA GCTTTCTTCG CCTTCGTGAA 
CGCTATCGCC GCCGCGGCAA AAGATTTGTC TATCTTGATG AAAGCGGTTT TGAGCCGGAG
GTTTCCCGTC GTTACGCTTA CGCTCCAAAG GGGCGGCGTG TTTATGGTCT GATCTCCGGT
CATCGCAGAC CGCGAACCTC TTTATTGGCC GCCCGTATGG ATGAAGGCTT TGAAGCGCCG
TTTCTATTTG AGGGAACCTG TAACACGGCT GTGTTCAATG CATGGCTGGA AAAAGAGCTT
TGCCCCTTGC TCAACAGCAA CCACATTGTC ATCATGGATA ATGCTCCGTT CCACAAAGCC
GTTTCTTCAC GTGAAATCAT CAAAAAAACA GGGGCGGGAA TTTTATTCCT CCCCCCTTAT
TCCCCTGACT TTAACCCCAT AGAAAAAGAC TTCGGAAATA TCAAAAAAAT CAGAGAATAC
AACGAACATG AAACCCTTGA GAATATCGTT GCAGCGTATC AGTAA
 
Protein sequence
MTGYTQRCNM KRKSFLRLRE RYRRRGKRFV YLDESGFEPE VSRRYAYAPK GRRVYGLISG 
HRRPRTSLLA ARMDEGFEAP FLFEGTCNTA VFNAWLEKEL CPLLNSNHIV IMDNAPFHKA
VSSREIIKKT GAGILFLPPY SPDFNPIEKD FGNIKKIREY NEHETLENIV AAYQ